ToledoEM / msigdfLinks
Molecular Signatures Database (MSigDB) in a tidy data frame
☆26Updated 2 weeks ago
Alternatives and similar repositories for msigdf
Users that are interested in msigdf are comparing it to the libraries listed below
Sorting:
- Identify and correct invalid gene symbols☆59Updated 9 months ago
- ☆38Updated 2 years ago
- Wrapper R scripts for performing a weighted-gene co-expression network analysis (WGCNA)☆28Updated 10 years ago
- R package wrapping bedtools☆42Updated 5 months ago
- ☆41Updated 7 years ago
- Interactive R package to quantify, analyse and visualise alternative splicing☆37Updated this week
- VennDetail: a bioconductor package for VennDiagram visualization and details extraction☆29Updated 4 months ago
- An R interface to the MEME Suite☆52Updated 2 months ago
- Software Package for Transcription Factor Binding Site (TFBS) Analysis☆30Updated 5 months ago
- An R for fast and flexible DNA methylation analysis☆33Updated last month
- Filtering of PDX samples for mouse derived reads☆28Updated 2 years ago
- Lightweight Iterative Gene set Enrichment in R☆57Updated 10 months ago
- A web-based application to perform Gene Set Enrichment Analysis (GSEA) using clusterProfiler and shiny R libraries☆17Updated 5 years ago
- 🧠 Visualizing Single Cell and Spatial Transcriptomics☆50Updated last month
- satuRn is a highly performant and scalable method for performing differential transcript usage analyses.☆22Updated 2 years ago
- Harvard FAS informatics scRNAseq workshop website☆38Updated 6 years ago
- Disambiguation algorithm for reads aligned to human and mouse genomes using Tophat or BWA mem☆31Updated 7 years ago
- documentation for trackViewer☆29Updated 6 years ago
- Robust, multivariate, multi-sample, multi-celltype QC for single cell RNA-seq data☆37Updated 2 years ago
- An R package to analyze single-cell V(D)J data☆28Updated last year
- workshop website on readthedocs☆19Updated this week
- An R Package for Geneset Enrichment Workflows☆76Updated this week
- scDataviz: single cell dataviz and downstream analyses☆63Updated 3 years ago
- A General Framework for Consensus Partitioning☆63Updated 6 months ago
- Machine learning algorithm to predict biological pathway relationships based on functional genomics networks☆20Updated 6 years ago
- An r package that works as a wrapper to homologene☆46Updated last year
- Software for preprocessing, filtering, alignment, and reporting of smallRNA-seq datasets☆23Updated 2 years ago
- 🧬 Gene analysis toolkit based on R☆57Updated 7 months ago
- A web-based interactive (wizard style) application to perform a guided single-cell RNA-seq data analysis and clustering based on Seurat v…☆32Updated 4 years ago
- R package containing the Cerebro application.☆40Updated 3 years ago