dbrant / ihc-profilerLinks
Plugin for the quantitative analysis of immunohistochemistry samples
☆11Updated 8 years ago
Alternatives and similar repositories for ihc-profiler
Users that are interested in ihc-profiler are comparing it to the libraries listed below
Sorting:
- TCGA data downloader☆15Updated 7 years ago
- IHC-image analysis workflow☆23Updated 7 years ago
- ☆56Updated 3 years ago
- A pixel classification based multiplexed image segmentation pipeline☆103Updated 2 years ago
- ☆41Updated 6 months ago
- ☆10Updated 4 years ago
- Cell-type Annotation for Single-cell Transcriptomics using Deep Learning with a Weighted Graph Neural Network☆106Updated 2 years ago
- Code accompanying the manuscript "Tissue Schematics map the specialization of immune tissue motifs and their appropriation by tumors"☆11Updated 2 years ago
- Open-source plugins of Hiplot (ORG) visualization platform.☆21Updated 7 months ago
- A list of positions (mostly biology-related) open to apply☆38Updated 7 months ago
- Repository containing notebooks and scripts associated with spatiotemporal profiling and modeling of brain across adult life☆45Updated 8 months ago
- ☆49Updated 4 months ago
- ☆73Updated 9 months ago
- Pan-cancer tils analysis study by Hongming Xu☆14Updated 5 years ago
- A simulator for single cell multi-omics and spatial omics data that provides ground truth to benchmark a wide range of methods.☆65Updated last month
- ☆31Updated 4 years ago
- Scripts to analyze TCGA data☆127Updated last year
- slideToolkit: a free toolset for analyzing full size virtual histology slides☆11Updated last year
- Machine learning-based integration model with elegant performance☆171Updated 2 months ago
- Utilizing single-cell omics from patients tumor to predict response and resistance.☆71Updated 2 years ago
- Multimodality Fusion Subtyping (Nature Communications)☆30Updated 7 months ago
- Python packaging for CPTAC data☆108Updated last year
- ☆15Updated 2 years ago
- DCAP:Integrating multi-omics data with deep learning for predicting cancer prognosis☆21Updated 4 years ago
- ☆216Updated last year
- GeneCompass☆102Updated last week
- SIMPLI is a highly configurable pipeline for the analysis of multiplexed imaging data.☆39Updated 2 months ago
- Python Implementation of the msiPL by Abdelmoula et al.☆26Updated 4 years ago
- ☆11Updated 5 years ago
- repository with the scripts to run examples of the publications with new functionalities of TCGAbiolinks☆16Updated 3 years ago