Repository for Short Course: Deep Learning in Omics
☆17Jan 13, 2022Updated 4 years ago
Alternatives and similar repositories for deep_omics
Users that are interested in deep_omics are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Presentation at the Joint Statistical Meetings 2021☆12Aug 8, 2021Updated 4 years ago
- Notes on academic-related things☆27Jul 29, 2019Updated 6 years ago
- Data, scripts, and outputs for the npj Biofilms and Microbiomes paper "Analysis of microbial compositions: A review of normalization and …☆11Aug 23, 2020Updated 5 years ago
- Automatic selection of number of principal components☆17Jun 27, 2022Updated 3 years ago
- Individual level Differential Expression Analysis for Single cells☆27Dec 24, 2022Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Toolkit for single-cell analysis of chromatin accessibility☆12Feb 27, 2020Updated 6 years ago
- ShinyLearner: a software framework for performing benchmarks of machine-learning classification algorithms☆18Dec 15, 2021Updated 4 years ago
- Reproducible pipeline for "Comprehensive evaluation of cell-type quantification methods for immuno-oncology", Sturm et al. 2019, https://…☆44Jul 6, 2020Updated 5 years ago
- ☆19Dec 1, 2021Updated 4 years ago
- ☆12Apr 28, 2026Updated 3 weeks ago
- Package to create MOVIE Plots☆12Oct 31, 2019Updated 6 years ago
- R code to work with the NIH RePORTER API☆11Feb 11, 2026Updated 3 months ago
- R/BioC package to estimate the cell composition of whole blood in DNA methylation samples in microarray or sequencing platforms☆18Nov 26, 2025Updated 5 months ago
- A series of generic SAS® macros to carry out streamlined routine data analyses with reports for observational studies☆12Dec 11, 2018Updated 7 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Integrative pipeline for profiling DNA copy number and inferring tumor phylogeny☆20Jan 15, 2020Updated 6 years ago
- ☆14Jan 25, 2023Updated 3 years ago
- Code and simulations using biologically annotated neural networks☆23Aug 23, 2021Updated 4 years ago
- fast bgen parser for python☆16Apr 13, 2026Updated last month
- False discovery rate regression☆10Nov 12, 2020Updated 5 years ago
- Code used for the single-cell RNA-Seq batch effects paper☆12Sep 25, 2017Updated 8 years ago
- High-Dimensional Undirected Graph Estimation☆13Jan 10, 2024Updated 2 years ago
- Class materials for Yale Biostats BIS557☆13Dec 4, 2019Updated 6 years ago
- python script to programmatically enrich your data using Enrichr API☆12Jul 5, 2017Updated 8 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Allele-Specific Expression by Single-Cell RNA Sequencing☆30Oct 15, 2020Updated 5 years ago
- Fit LOg-RAtio Lasso regression for compositional covariates☆16Feb 8, 2026Updated 3 months ago
- pliman R package☆19Feb 16, 2026Updated 3 months ago
- ☆15Mar 9, 2018Updated 8 years ago
- scType goes spatial: ScType enables fast and accurate cell type identification from spatial transcriptomics data☆11Jul 11, 2024Updated last year
- reorganize paper of deconvolution method☆11Dec 14, 2023Updated 2 years ago
- Pipeline to implement a "TAD_Pathways" analysis. Discover candidate genes based on association signals in TADs☆11Dec 21, 2019Updated 6 years ago
- Unbiased single-cell transcriptomic data cell type identification☆15May 7, 2024Updated 2 years ago
- characterizing spatial gene expression heterogeneity in spatially resolved single-cell transcriptomics data with nonuniform cellular dens…☆96Apr 30, 2026Updated 3 weeks ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- This network estimation procedure combines l1-regularized logistic regression with model selection based on the Extended Bayesian Informa…☆10Oct 12, 2023Updated 2 years ago
- ☆14May 1, 2024Updated 2 years ago
- RaMWAS: Fast Methylome-Wide Association Study Pipeline for Enrichment Platforms☆10Sep 22, 2021Updated 4 years ago
- Supervised Adversarial Alignment of Single-Cell RNA-seq Data☆32Feb 6, 2020Updated 6 years ago
- logistic factor analysis☆16Jan 29, 2026Updated 3 months ago
- LaTeX template of graduate Thesis [University of Chinese Academy of Sciences]☆12Nov 7, 2017Updated 8 years ago
- False discovery rate smoothing☆14May 8, 2020Updated 6 years ago