Alternatives and similar repositories for msigdbr:

Users that are interested in msigdbr are comparing it to the libraries listed below

• GabrielHoffman / variancePartition
  Quantify and interpret divers of variation in multilevel gene expression experiments
  ☆62Updated 2 months ago
• kevinblighe / CorLevelPlot
  Visualise correlation results and test significancies of these
  ☆23Updated 5 years ago
• Shians / Glimma
  Glimma R package
  ☆50Updated 6 months ago
• Bioconductor / GenomicRanges
  Representation and manipulation of genomic intervals
  ☆44Updated 4 months ago
• gladkia / igvShiny
  An htmlwidget version of igv, for RStudio and Shiny apps
  ☆38Updated 4 months ago
• hansenlab / minfi
  Devel repository for minfi
  ☆60Updated 10 months ago
• waldronlab / MultiAssayExperiment
  Bioconductor package for management of multi-assay data
  ☆71Updated last month
• stephenturner / annotables
  R data package for annotating/converting Gene IDs
  ☆163Updated 2 years ago
• Bioconductor / basilisk
  Clone of the Bioconductor repository for the basilisk package.
  ☆27Updated last month
• RGLab / ggcyto
  Visualize Cytometry data with ggplot2
  ☆58Updated last year
• csoneson / ExploreModelMatrix
  Explore design matrices interactively with R/Shiny
  ☆37Updated 2 months ago
• stemangiola / bioc_2020_tidytranscriptomics
  Workshop on tidytranscriptomics: Performing tidy transcriptomics analyses with tidybulk, tidyverse and tidyheatmap
  ☆26Updated 4 years ago
• waldronlab / HGNChelper
  Identify and correct invalid gene symbols
  ☆59Updated 4 months ago
• bvieth / powsimR
  Power analysis is essential to optimize the design of RNA-seq experiments and to assess and compare the power to detect differentially ex…
  ☆106Updated last year
• mikelove / preNivolumabOnNivolumab
  EDA, QC, and DESeq2 / edgeR analysis of 109 RNA-seq samples of immunotherapy treatment
  ☆56Updated last year
• ssayols / rrvgo
  Reduce + Visualize Gene Ontology
  ☆25Updated 4 months ago
• federicomarini / pcaExplorer
  pcaExplorer - Interactive exploration of Principal Components of Samples and Genes in RNA-seq data
  ☆56Updated 2 weeks ago
• Bioconductor / OrchestratingSingleCellAnalysis-release
  An online companion to the OSCA manuscript demonstrating Bioconductor resources and workflows for single-cell RNA-seq analysis.
  ☆36Updated 2 years ago
• federicomarini / GeneTonic
  Enjoy your transcriptomic data and analysis responsibly - like sipping a cocktail
  ☆77Updated this week
• barkasn / fastSave
  Save and load your R sessions faster using parallel compression
  ☆25Updated 6 years ago
• DillonHammill / CytoExploreR
  Interactive Cytometry Data Analysis
  ☆65Updated this week
• stemangiola / tidySummarizedExperiment
  Brings SummarizedExperiment to the tidyverse
  ☆26Updated 9 months ago
• hhhh5 / ewastools
  A collection of functions for working with DNA methylation microarrays (quality control, pre-processing, LC estimation, ...)
  ☆25Updated last year
• arnesmits / DEP
  DEP package
  ☆28Updated 2 years ago
• tidyomics / plyranges
  A grammar of genomic data transformation
  ☆144Updated this week
• stemangiola / tidybulk
  Brings bulk and pseudobulk transcriptomics to the tidyverse
  ☆171Updated this week
• wjawaid / enrichR
  An R interface to enrichR
  ☆90Updated last month
• Bioconductor / BiocWorkshops
  2018 Bioconductor Workshops
  ☆75Updated 5 years ago
• hawn-lab / workshops_UW_Seattle
  ☆24Updated 3 years ago
• tgirke / systemPipeR
  Project Website:
  ☆53Updated 6 months ago