A web-based application to perform Gene Set Enrichment Analysis (GSEA) using clusterProfiler and shiny R libraries
☆16Jan 27, 2020Updated 6 years ago
Alternatives and similar repositories for ClusterProfShinyGSEA
Users that are interested in ClusterProfShinyGSEA are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A web-based application to perform Over-Representation Analysis (ORA) using clusterProfiler and shiny R libraries☆12Jan 22, 2020Updated 6 years ago
- a web-based R shiny application that wraps DESeq2 R package☆13Apr 19, 2020Updated 5 years ago
- Shiny-Seq: A web based interactive pipeline to analyze RNA-Seq data☆15Jan 14, 2018Updated 8 years ago
- RIESLING: Super-enhancer identification. (Rapid Identification of EnhancerS LInked to Nearby Genes)☆10Jun 28, 2018Updated 7 years ago
- Differential gene expression analysis and pathway analysis of RNAseq data☆32Jul 3, 2025Updated 8 months ago
- Disease Ontology Semantic and Enrichment analysis☆125Updated this week
- Code for EpiMap data browser☆14Jun 4, 2024Updated last year
- NEPAL is to calculate neuroendocrine (NE) risk score from bulk and single-cell transcriptomics of both human and mouse prostate cancer (P…☆15Apr 23, 2024Updated last year
- dplyr verbs for clusterProfiler outputs☆13Mar 12, 2020Updated 6 years ago
- The START App: R Shiny Transcriptome Analysis Resource Tool☆87Nov 11, 2020Updated 5 years ago
- ☆16Apr 29, 2020Updated 5 years ago
- A web-based interactive (wizard style) application to perform a guided single-cell RNA-seq data analysis and clustering based on Seurat v…☆32Sep 14, 2020Updated 5 years ago
- An analysis of Arabidopsis RNA-seq data (hy5 mutant and wt, two replicates each; SRA accession SRX029582)☆14Jul 3, 2012Updated 13 years ago
- Sashimi plots for RNA-seq data using detected transcripts☆31Updated this week
- Detection of super-enhancers in cancer data☆21Apr 10, 2023Updated 2 years ago
- ASAP : Automated Single-cell Analysis Pipeline☆27Mar 10, 2026Updated last week
- Official PyTorch implementation of PolypMix☆14Nov 22, 2024Updated last year
- Visualization of Functional Enrichment Result☆257Mar 2, 2026Updated 3 weeks ago
- Fast Structural Variation Detection Toolbox☆19Feb 16, 2015Updated 11 years ago
- Project Website:☆54Mar 6, 2026Updated 2 weeks ago
- Create QC and summary reports for Alevin output☆31Jan 27, 2026Updated last month
- Using genome-wide markers for polyploid breeding☆12Mar 8, 2026Updated 2 weeks ago
- microRNA PREdiction From small RNA-seq data☆31Dec 28, 2017Updated 8 years ago
- Pan-cancer tils analysis study by Hongming Xu☆14Oct 29, 2020Updated 5 years ago
- Various Classification models used are Logistic regression, K-NN, Support Vector Machine, Kernel SVM, Naive Bayes, Decision Tree Classifi…☆10Jan 18, 2018Updated 8 years ago
- 5-day workshop on Metabolomics and Data Analysis☆18Sep 1, 2019Updated 6 years ago
- Using ML to predict the diagnosis, management, and severity of pediatric appendicitis☆12Feb 14, 2023Updated 3 years ago
- Computational Suite for Bioinformaticians and Biologists (CSBB) is a RShiny application developed with an intention to empower researcher…☆36Apr 5, 2023Updated 2 years ago
- Computational analyses of WGS, mate-pair, RNA-seq, Hi-C and Capture-C data from highly rearranged balancer chromosomes in Drosophila mela…☆10Sep 25, 2019Updated 6 years ago
- Workflow management with Nextflow and nf-core☆30Jan 21, 2025Updated last year
- A single package (command line tool and library) in Java to validate, simulate, translate and analyse NeuroML 2 models☆12Feb 12, 2025Updated last year
- Molecular Signatures Database (MSigDB) in a tidy data frame☆26Feb 2, 2026Updated last month
- Deep Learning for Automatic Differential Diagnosis of Primary Central Nervous System Lymphoma and Glioblastoma: Multi-parametric MRI base…☆14Mar 20, 2021Updated 5 years ago
- Viola is a flexible and powerful python package designed specifically for analysis of genomic structural variant (SV) signatures.☆28Jul 26, 2024Updated last year
- Concept bottleneck models for multiview data with incomplete concept sets☆16Nov 24, 2023Updated 2 years ago
- Scripts and notebooks used in Akgol Oksuz et al. paper☆11Jan 18, 2021Updated 5 years ago
- A visualization tool for Systems-Level Interactive Data Exploration☆12Jan 12, 2022Updated 4 years ago
- ☆14Apr 15, 2024Updated last year
- WIP : regular expressions for identifying and extracting values from HGVS nomenclature☆14Apr 15, 2018Updated 7 years ago