R package for WikiPathways API
☆20Nov 3, 2025Updated 10 months ago
Alternatives and similar repositories for rWikiPathways
Users that are interested in rWikiPathways are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Python Client Package for WikiPathways☆28Mar 15, 2026Updated 5 months ago
- Visualize cancer genomes with FAIR single-cell RNA-seq data☆13Jan 5, 2023Updated 3 years ago
- Enhancer-Gene Prediction Pipeline based on logistic regression and ABC model☆31Jul 14, 2026Updated last month
- Issue tracker for the Open Targets Platform☆13Jul 8, 2025Updated last year
- This repository contains curricular material, lecture notes, labs, assignments, exams, code, solutions from the Spring 2022 version of BI…☆16May 24, 2022Updated 4 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- WITCH is a multiple sequence alignment method that uses multiple weighted HMMs to align unaligned sequences and find consensuses.☆13Nov 18, 2025Updated 9 months ago
- ☆10Updated this week
- This is the public repository for the EPIC tool.☆19Aug 3, 2022Updated 4 years ago
- My notes/usage examples for various Bioconductor packages☆15Jan 9, 2017Updated 9 years ago
- This repository contains a reciprocal BLAST program for filtering down BLAST results to best bidirectional hits. It also contains a toolk…☆18Jan 16, 2025Updated last year
- Contrastive Poisson latent variable models (CPLVMs)☆11Feb 7, 2022Updated 4 years ago
- Various mgcv-related GAM utilities☆11Aug 28, 2026Updated last week
- PipeTaxon exposes the ncbi taxonomy database as a REST API.☆22Feb 15, 2023Updated 3 years ago
- A collection of algorithms done in JavaScript with visual demos☆11Apr 17, 2023Updated 3 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- ☆13Apr 16, 2021Updated 5 years ago
- Materials for the R/Medicine 2024 Setting Up a Dockerized R Development Environment with VScode workshop☆19Jun 12, 2024Updated 2 years ago
- Collection of scripts that include programmatic io and control of Cytoscape☆92Jun 30, 2026Updated 2 months ago
- Contentmining of Open phytochemical literature for medicinal activities☆27Jan 31, 2024Updated 2 years ago
- ANI based satellite annotation☆29Aug 6, 2026Updated 3 weeks ago
- R/Package Version Check☆23Oct 22, 2021Updated 4 years ago
- Leviathan: A fast, memory-efficient, and scalable taxonomic and pathway profiler for (pan)genome-resolved metagenomics and metatranscript…☆27Aug 4, 2026Updated 3 weeks ago
- Gene expression viewer template☆12Aug 30, 2017Updated 9 years ago
- A sandbox for benchmarking detection of out-of-reference cells in single-cell genomics data☆14Oct 21, 2024Updated last year
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- We aim to make it easier for biomedical researchers to access and customize synthetic sequence data for the purpose of sharing and testin…☆11Jul 22, 2019Updated 7 years ago
- ☆15Apr 16, 2026Updated 4 months ago
- ☆33Nov 9, 2022Updated 3 years ago
- ClusterScan, search for clusters of features in a given annotation.☆10Aug 26, 2021Updated 5 years ago
- ☆12Mar 17, 2023Updated 3 years ago
- Spacewalk is an application for displaying and interacting with super-resolution chromatin tracing data in 3D. SpaceWalk includes igv.js …☆12Nov 8, 2025Updated 9 months ago
- A package for calculating indices for biomonitoring of running waters with a focus on macroinvertebrate community. Still in development.☆12May 16, 2026Updated 3 months ago
- Camiel's scATAC-seq analysis pipeline☆15Apr 15, 2024Updated 2 years ago
- A set of Shiny apps to provide interactive enrichment analysis and exploration of results.☆31Aug 15, 2026Updated 2 weeks ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- The AnnSQL package enables SQL based queries on AnnData objects.☆42Aug 20, 2025Updated last year
- Automated Detection and Qualification of Differential Methylation☆16Nov 21, 2023Updated 2 years ago
- GitHub pages for GPML-Repo☆12Updated this week
- Resources for grounding protein families and complexes from text and describing their hierarchical relationships.☆18Mar 26, 2026Updated 5 months ago
- INTERSTELLAR: Interpretation, scalable transformation, and emulation of large-scale sequencing reads☆17May 22, 2024Updated 2 years ago
- Multiple Genome Viewer☆12Aug 26, 2026Updated last week
- An end-to-end computational pipeline for large Perturb-seq screens☆16Jul 27, 2026Updated last month