abdullah009 / kcmbt_mtLinks
k-mer Counter based on Multiple Burst Trees (multi-threaded)
☆13Updated 9 years ago
Alternatives and similar repositories for kcmbt_mt
Users that are interested in kcmbt_mt are comparing it to the libraries listed below
Sorting:
- blast, shmlast☆21Updated 5 years ago
- Accurate, Lightweight Clustering of de novo Transcriptomes using Fragment Equivalence Classes☆31Updated last year
- de Bruijn Graph REAd mapping Tool☆14Updated 8 years ago
- Paint genomes with taxa-specific k-mer probabilities☆15Updated 3 years ago
- Classify sequencing reads using MinHash.☆48Updated 5 years ago
- reference free variant assembly☆34Updated 2 years ago
- Accurate, resource-frugal and deterministic DNA sequence classifier.☆36Updated last week
- ☆18Updated 8 years ago
- Metagenomic profiling and phylogenetic distances via common kmers☆42Updated 4 years ago
- ☆13Updated 9 years ago
- Python bindings to minimap2☆16Updated 8 years ago
- SAMsift: advanced filtering and tagging of SAM/BAM alignments using Python expressions.☆23Updated 3 weeks ago
- Accurate and fast taxonomic classification using pseudoaligning☆21Updated 8 years ago
- Rapid competitive read demulitplexer. Made with tries.☆23Updated 4 months ago
- de Bruijn Graph-based read aligner☆33Updated 7 years ago
- de novo targeted gene assembly☆23Updated 4 years ago
- Reference-free variant discovery in large eukaryotic genomes☆41Updated 4 years ago
- Fast but inaccurate adapter trimmer for Illumina reads☆16Updated 3 years ago
- Scaffolding genomes using synthetic long read clouds☆20Updated 9 years ago
- Python bindings for Bifrost's compacted colored de Bruijn Graph with a NetworkX-compatible API☆27Updated last year
- Tool (experimental) to compute layout from overlaps with spectral algorithm☆11Updated 7 years ago
- full taxonomer cython repository☆22Updated 5 years ago
- Annotated Genome Optimization Using Transcriptome Information☆20Updated 5 years ago
- Genomic Assemblies Merger for NGS☆26Updated last year
- What's The Function of these genes?☆22Updated 8 years ago
- Pipeline for Evaluating Prokaryotic References☆11Updated 9 years ago
- Find Unique genomic Regions☆30Updated 3 weeks ago
- Scripts for implementing read until and other examples.☆32Updated 5 years ago
- Utility program for extracting sequences from a fasta/fastq file☆35Updated 9 months ago
- Indel-aware consensus for aligned BAM☆21Updated last month