Learning notes for DBiT-Notes
☆11Nov 28, 2024Updated last year
Alternatives and similar repositories for DBiT-Notes
Users that are interested in DBiT-Notes are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆34Apr 8, 2023Updated 3 years ago
- Patho-DBiT is a platform to spatially decode RNA Biology in archival FFPE tissues.☆14Aug 15, 2024Updated last year
- ☆23Mar 29, 2023Updated 3 years ago
- ☆12Nov 20, 2023Updated 2 years ago
- Inferring allele-specific copy number aberrations and tumor phylogeography from spatially resolved transcriptomics☆49Aug 18, 2025Updated 9 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- 基于FPGA实现的流水灯项目☆10Mar 19, 2018Updated 8 years ago
- workshop website on readthedocs☆21May 11, 2026Updated last week
- Niche Interactions and Cellular Heterogeneity in Extracellular Signaling☆58Jan 29, 2026Updated 3 months ago
- Python package designed for single-cell calling cards data☆16Jun 8, 2025Updated 11 months ago
- R functions underlying ExpressAnalyst☆14Updated this week
- ☆60Jan 9, 2026Updated 4 months ago
- MALDIpy: a Python package for single-cell analysis of imaging mass spectrometry data (Cell Metabolism 2024)☆20Jun 12, 2024Updated last year
- Scripts capable of re-creating figures from Van Valen Lab publications☆18May 9, 2022Updated 4 years ago
- Download and Convert METASPACE datasets to common formats such as AnnData or SpatialData☆16Feb 27, 2026Updated 2 months ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Demo GitHub repo for laboratory research☆17Aug 20, 2024Updated last year
- ☆23Jan 20, 2021Updated 5 years ago
- ST Pipeline contains the tools and scripts needed to process and analyze the raw files generated with the Spatial Transcriptomics method …☆95Feb 11, 2026Updated 3 months ago
- Containerized workflow for analysis of human diabetic kidney disease by snRNA-seq and snATAC-seq☆17May 18, 2023Updated 3 years ago
- pipeline for demultiplex and align both ATAC and RNA data generated in SHARE-seq☆16Jun 20, 2022Updated 3 years ago
- Integrative Analyses across 388 human brain samples at single-cell resolution☆18Mar 21, 2024Updated 2 years ago
- ☆66May 12, 2026Updated last week
- Epigenomics Program pipeline to analyze SHARE-seq data.☆23Mar 30, 2025Updated last year
- Official website for Sanders Lab☆17May 29, 2024Updated last year
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- SCENIC+ is a python package to build gene regulatory networks (GRNs) using combined or separate single-cell gene expression (scRNA-seq) a…☆255Jan 16, 2026Updated 4 months ago
- Nextflow pipeline to re-process all public single-cell RNA-seq data☆33Jul 9, 2025Updated 10 months ago
- MUSE is a deep learning approach characterizing tissue composition through combined analysis of morphologies and transcriptional states f…☆37May 10, 2022Updated 4 years ago
- ☆26Feb 25, 2025Updated last year
- Workflow for analysis of healthy human kidney by snRNAseq and snATACseq☆25Mar 13, 2023Updated 3 years ago
- One-liner for mapping orthologous genes in both R and python using ENSEMBL BioMART☆24Nov 11, 2021Updated 4 years ago
- Deciphering cell-cell communication from spatially resolved transcriptomic data at single-cell resolution with subgraph-based attentional…☆29Sep 6, 2024Updated last year
- Inferring CNV data from single cell ATAC seq☆28Jun 24, 2025Updated 10 months ago
- [arXiv '24] Efficient Cell Nuclei Instance Segmentation with Large Convolution Kernels☆48Aug 28, 2024Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- An algorithm for mapping cell state transitions.☆28Mar 3, 2023Updated 3 years ago
- ☆47Apr 8, 2025Updated last year
- ☆49Apr 21, 2026Updated last month
- ☆53Oct 9, 2025Updated 7 months ago
- Cell age determination by scATAC-seq and bulk-ATAC-seq☆33Jan 30, 2026Updated 3 months ago
- A count based method for detecting doublets from single nucleus ATAC-seq (snATAC-seq) data.☆34Jan 3, 2023Updated 3 years ago
- R package to detect breakpoints and assign somies to scATAC-seq data☆43Dec 1, 2025Updated 5 months ago