Alternatives and similar repositories for SpliceTransformer:

Users that are interested in SpliceTransformer are comparing it to the libraries listed below

• sjgosai / boda2
  Computational Optimization of DNA Activity (CODA)
  ☆56Updated 2 months ago
• lanagarmire / Asgard
  ☆41Updated last year
• tianshilu / pMTnet
  Deep Learning the T Cell Receptor Binding Specificity of Neoantigen
  ☆78Updated 2 years ago
• johli / aparent
  APA Regression Net - Predict and Engineer Alternative Polyadenylation
  ☆39Updated 3 years ago
• xiongxslab / Translatomer
  ☆18Updated last month
• GET-Foundation / get_model
  A modular framework for multimodal cross-cell-type transcriptional regulation models
  ☆64Updated 3 weeks ago
• epigen / KPNN
  Knowledge-primed neural networks
  ☆35Updated 2 years ago
• brianpenghe / Bio-Jobs
  A list of positions (mostly biology-related) open to apply
  ☆34Updated 4 months ago
• pinellolab / EPInformer
  code to run EPInformer for gene expression prediction and gene-enhancer links prioritization
  ☆38Updated 4 months ago
• sidhomj / DeepTCR
  Deep Learning Methods for Parsing T-Cell Receptor Sequencing (TCRSeq) Data
  ☆118Updated 2 years ago
• OSU-BMBL / scDEAL
  Deep Transfer Learning of Drug Sensitivity by Integrating Bulk and Single-cell RNA-seq data
  ☆52Updated 8 months ago
• FunctionLab / sei-framework
  code to run sei and obtain sei and sequence class predictions
  ☆99Updated 2 years ago
• YeoLab / eCLIP
  ☆37Updated 2 years ago
• epigen / CellWhisperer
  CellWhisperer bridges the gap between transcriptomics data and natural language, enabling intuitive interaction with scRNA-seq datasets
  ☆52Updated 5 months ago
• XWangLabTHU / NeuronMotif
  NeuronMotif: deciphering cis-regulatory codes by layerwise demixing of deep neural networks
  ☆15Updated last year
• mostafavilabuw / EnformerAssessment
  ☆19Updated 7 months ago
• GfellerLab / MixMHC2pred
  HLA-II ligand predictor.
  ☆42Updated last year
• johahi / borzoi-pytorch
  Pytorch implementation of the Borzoi model from Calico, and Flashzoi, a 3x faster Borzoi enhancement.
  ☆42Updated last week
• cclab-brca / neoadjuvant-therapy-response-predictor
  ☆54Updated 2 years ago
• sallyqus / awesome-AI4SingleCell
  Must-read papers on deep learning based methodology paper for single cell data analysis
  ☆18Updated 3 years ago
• xCompass-AI / GeneCompass
  GeneCompass
  ☆72Updated 8 months ago
• cliffren / PENCIL
  PENCIL is a novel tool for singlecell data analysis to identify phenotype associated subpopulations and informative genes simultaneously.
  ☆28Updated last year
• pathint / reoa
  Relative Expression Ordering Analysis (REOA) package
  ☆20Updated 2 years ago
• wassermanlab / ExplaiNN
  ExplaiNN: interpretable and transparent neural networks for genomics
  ☆47Updated last month
• tanjimin / C.Origami
  C.Origami, a prediction and screening framework for cell type-specific 3D chromatin structure.
  ☆73Updated 8 months ago
• TencentAILabHealthcare / scPROTEIN
  ☆50Updated 3 months ago
• theislab / scgen-reproducibility
  ☆24Updated 4 years ago
• XinmingTu / Awesome-Bio-ML-PKU
  This is a repo that includes some resources about machine learning and the application in biology. We are students/alumni of Peking Unive…
  ☆15Updated 5 years ago
• SmritiChawla / Precily
  ☆30Updated 2 years ago
• sanderlab / scPerturb
  scPerturb: A resource and a python/R tool for single-cell perturbation data
  ☆116Updated last month