broadinstitute / g2papiLinks
Python Client Library for the G2P Portal API
☆15Updated 5 months ago
Alternatives and similar repositories for g2papi
Users that are interested in g2papi are comparing it to the libraries listed below
Sorting:
- Comprehensive Python client for the Uniprot REST API☆54Updated 3 months ago
- VDJ assignment and antibody sequence annotation. Scalable from a single sequence to billions of sequences.☆44Updated last week
- Evolutionary conservation estimation of residues or nucleotides☆57Updated 3 years ago
- Python package and command line tool for epitope prediction☆52Updated last year
- Scripts for "Determining protein structures using deep mutagenesis", Schmiedel & Lehner, Nature Genetics, 2019☆19Updated 6 years ago
- Convert PDB residues to their Uniprot equivalents☆17Updated 5 years ago
- a collection of colabs useful for molecular biology☆31Updated last year
- A software-suite to perform multiple protein structure alignment and structure feature extraction.☆31Updated 2 years ago
- MOLeculAR structure annoTator☆33Updated last year
- Epitope immunogenicity prediction through in silico TCR-peptide contact potential profiling.☆25Updated 2 years ago
- GraphPart, a data partitioning method for ML on biological sequences☆33Updated 2 years ago
- RiboNN: predicting translation efficiencies from mRNA sequences☆49Updated last week
- An error model and pipeline for analyzing deep mutational scanning (DMS) data and diagnosing common experimental pathologies☆39Updated 4 months ago
- Pipeline for assessing the tractability of potential targets (starting from Gene IDs)☆29Updated 11 months ago
- Analysis platform for large-scale dose-dependent data☆26Updated last month
- An R package to calculate indices and theoretical physicochemical properties of peptides and protein sequences.☆96Updated last year
- A platform to do RNA science☆27Updated 4 years ago
- Code, intermediate results and an interactive visualisation on prediction of putative novel enzymes and small molecule binding proteins p…☆27Updated 2 years ago
- A Python package for mapping sequence aligned data onto protein structures☆37Updated 4 years ago
- Python package for investigating the structural context of PTMs☆28Updated last year
- Absolve antibody variable domain sequence analysis☆18Updated 7 years ago
- MODELLER-based, anchor restrained, Peptide-MHC Modelling pipeline☆26Updated last month
- DeePhase predictor of homotypic liquid-liquid phase separation of proteins & the code associated with the paper "Learning the molecular g…☆18Updated 4 years ago
- Deep-learning empowered prediction and generation of immunogenic epitopes for T cell immunity☆74Updated 2 years ago
- Decoding the functional networks of non-model organisms☆11Updated last month
- HLA-I ligand predictor☆43Updated 3 months ago
- Fast protein domain structure embedding+search tool☆27Updated 4 months ago
- MaxQuant with snakemake and singularity workflow for open and scalable mass spectrometry data analysis on Linux computing clusters☆27Updated 7 years ago
- Shiny app to easily create publishable plots for scientific papers☆38Updated 5 months ago
- Python wrapper to design RNA molecules using RNAblueprint, RNARedPrint and for energy evaluations ViennaRNA, Hotknots, pKiss and Nupack.☆21Updated 7 years ago