broadinstitute / g2papiLinks
Python Client Library for the G2P Portal API
☆15Updated 5 months ago
Alternatives and similar repositories for g2papi
Users that are interested in g2papi are comparing it to the libraries listed below
Sorting:
- A software-suite to perform multiple protein structure alignment and structure feature extraction.☆31Updated 2 years ago
- Evolutionary conservation estimation of residues or nucleotides☆57Updated 3 years ago
- VDJ assignment and antibody sequence annotation. Scalable from a single sequence to billions of sequences.☆44Updated 3 weeks ago
- Comprehensive Python client for the Uniprot REST API☆55Updated 4 months ago
- An error model and pipeline for analyzing deep mutational scanning (DMS) data and diagnosing common experimental pathologies☆39Updated 4 months ago
- GraphPart, a data partitioning method for ML on biological sequences☆33Updated 2 years ago
- Epitope immunogenicity prediction through in silico TCR-peptide contact potential profiling.☆25Updated 2 years ago
- Decoding the functional networks of non-model organisms☆12Updated 2 months ago
- a collection of colabs useful for molecular biology☆32Updated last year
- Python package and command line tool for epitope prediction☆52Updated last year
- MODELLER-based, anchor restrained, Peptide-MHC Modelling pipeline☆27Updated last week
- Convert PDB residues to their Uniprot equivalents☆17Updated 5 years ago
- ☆13Updated last year
- Analysis platform for large-scale dose-dependent data☆26Updated 2 months ago
- Deep-learning empowered prediction and generation of immunogenic epitopes for T cell immunity☆75Updated 2 years ago
- DeePhase predictor of homotypic liquid-liquid phase separation of proteins & the code associated with the paper "Learning the molecular g…☆19Updated 4 years ago
- Code for LazyAF pipeline☆23Updated 2 years ago
- Python code to color a PDB structure based on parameters from a multiple sequence alignment☆33Updated last month
- A Python package for mapping sequence aligned data onto protein structures☆37Updated 4 years ago
- Scripts for "Determining protein structures using deep mutagenesis", Schmiedel & Lehner, Nature Genetics, 2019☆19Updated 6 years ago
- Frankies Scalable, AI-Based Antibody Design Pipeline☆18Updated 5 months ago
- DeepECtransformer☆29Updated 2 years ago
- Python package for investigating the structural context of PTMs☆28Updated last year
- Code, intermediate results and an interactive visualisation on prediction of putative novel enzymes and small molecule binding proteins p…☆27Updated 2 years ago
- HLA-I ligand predictor☆43Updated 4 months ago
- Shiny app to easily create publishable plots for scientific papers☆39Updated 6 months ago
- ☆21Updated 4 months ago
- An R package to calculate indices and theoretical physicochemical properties of peptides and protein sequences.☆97Updated 2 years ago
- Code repository for the SPOC tool for scoring binary AF-M predicitons.☆15Updated 9 months ago
- R package for functionally scoring phosphorylation sites☆22Updated 6 years ago