astrazeneca-cgr-publications / JARVISView external linksLinks
JARVIS: a comprehensive deep learning framework to prioritise non-coding variants in whole genomes
☆25Jan 8, 2025Updated last year
Alternatives and similar repositories for JARVIS
Users that are interested in JARVIS are comparing it to the libraries listed below
Sorting:
- mantis-ml: Stochastic semi-supervised learning to prioritise genes from high throughput genomic screens☆30Jan 26, 2024Updated 2 years ago
- ☆24Nov 27, 2024Updated last year
- A pipeline creation tool using Snakemake☆12Updated this week
- NHC: A computational approach to detect physiological homogeneity in the midst of genetic heterogeneity☆12Feb 4, 2024Updated 2 years ago
- A web-browser app to visualise, interpret and prioritise genomic/transcriptomic structural variations (SVs) of multiple samples.☆13Oct 7, 2025Updated 4 months ago
- Base-wise aggregation and functional prediction for human non-coding regulatory variants☆15Dec 20, 2023Updated 2 years ago
- Beginning of a textbook for shell skills for bioinformatics☆11Oct 7, 2025Updated 4 months ago
- A high throughput automated drug discovery pipeline.☆29Mar 16, 2018Updated 7 years ago
- DeepMP is a computational tool to detect DNA modifications in Nanopore sequencing data☆28Mar 18, 2022Updated 3 years ago
- ☆13Nov 28, 2018Updated 7 years ago
- Code from "Deep Learning Of The Regulatory Grammar Of Yeast 5′ Untranslated Regions From 500,000 Random Sequences"☆16Sep 26, 2017Updated 8 years ago
- Classify web visitor queries so you can chart, and respond to, trends in information seeking☆14Sep 7, 2023Updated 2 years ago
- Course on good principles & practices in Data Management (https://tinyurl.com/cruk-myrd)☆18May 2, 2023Updated 2 years ago
- Dedicated QC-only pipeline for sequencing data. The pipeline will run a (potentially large) set of QC tools and can output global and gro…☆19Updated this week
- Detecting Aberrant Splicing Events from RNA-sequencing data☆16Dec 10, 2024Updated last year
- Structural variant pipeline☆18Jun 25, 2020Updated 5 years ago
- This is a pipeline for variant annotation in the diagnosis of rare genetic disorders. It relies on open source data and has instructions …☆18Mar 20, 2023Updated 2 years ago
- Open Targets python framework for post-GWAS analysis☆53Updated this week
- 肿瘤突变负荷学习笔记（tumor mutation burden）☆16Dec 10, 2019Updated 6 years ago
- Functional annotation pipeline for proteins from non-model organisms implemented in Nextflow☆19Feb 28, 2022Updated 3 years ago
- ☆18Aug 22, 2021Updated 4 years ago
- PuntSeq - Chasing the microbial diversity of Cambridge's freshwater☆20Nov 12, 2020Updated 5 years ago
- Location of public benchmarking; primarily final results☆18Feb 17, 2025Updated 11 months ago
- ☆19Sep 14, 2024Updated last year
- Filter and prioritize fusion calls☆20Jan 23, 2026Updated 3 weeks ago
- Automatised pipeline of ConsensuSV workflow.☆24Aug 23, 2023Updated 2 years ago
- Burden testing against public controls☆50Feb 27, 2024Updated last year
- Simple and efficient access to genomic data for deep learning models.☆42Jan 9, 2020Updated 6 years ago
- A phenotype-based tool for variant prioritization in WES and WGS data☆42Nov 21, 2022Updated 3 years ago
- ☆20Nov 30, 2023Updated 2 years ago
- Materials for EN.601.449/EN.601.649 Computational Genomics: Applied Comparative Genomics☆22Dec 8, 2022Updated 3 years ago
- ☆22Mar 7, 2023Updated 2 years ago
- ☆25Dec 18, 2024Updated last year
- BANDITS: Bayesian ANalysis of DIfferenTial Splicing☆19Sep 29, 2025Updated 4 months ago
- Bioinformatics learning (for high performance computing, big data, and machine learning)☆19Jun 8, 2017Updated 8 years ago
- 🤖 Open‑source deep-learning-based splice‑site predictor that decodes splicing patterns across species☆38Dec 11, 2025Updated 2 months ago
- A snakemake pipeline for 10X genomics cellranger☆22Oct 13, 2025Updated 4 months ago
- Two pass alignment for long reads☆22Mar 9, 2021Updated 4 years ago
- Slinker offers a succinct and complementary method to visualise RNA-Seq data through superTranscripts.☆19Jun 13, 2022Updated 3 years ago