JARVIS: a comprehensive deep learning framework to prioritise non-coding variants in whole genomes
☆24Jan 8, 2025Updated last year
Alternatives and similar repositories for JARVIS
Users that are interested in JARVIS are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- mantis-ml: Stochastic semi-supervised learning to prioritise genes from high throughput genomic screens☆31Jan 26, 2024Updated 2 years ago
- Locus-to-gene scoring pipeline☆13May 11, 2026Updated 5 months ago
- Hail batch pipeline to run SAIGE on CPG's GCP☆12Oct 16, 2025Updated last year
- Base-wise aggregation and functional prediction for human non-coding regulatory variants☆15Dec 20, 2023Updated 2 years ago
- Modeling the genomic regulatory codes of fly, mouse, worm, and fish with deep learning☆17Apr 6, 2021Updated 5 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- This is a pipeline for variant annotation in the diagnosis of rare genetic disorders. It relies on open source data and has instructions …☆17Mar 20, 2023Updated 3 years ago
- Jupyter Notebook to demonstrate the use of Neural Networks for Transcription Factor Binding Site Prediction☆13Jun 20, 2017Updated 9 years ago
- ☆24Nov 27, 2024Updated last year
- Standard analysis routine for samples that were generated with Lexogen's QuantSeq pool library preparation kit.☆12Oct 31, 2022Updated 4 years ago
- ☆20Sep 14, 2024Updated 2 years ago
- ☆10Updated this week
- ☆13Jul 26, 2026Updated 3 months ago
- ☆10Dec 29, 2021Updated 4 years ago
- ☆15Jun 8, 2023Updated 3 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- ☆26Jun 4, 2025Updated last year
- ☆20Nov 30, 2023Updated 2 years ago
- ☆27Oct 22, 2026Updated 2 weeks ago
- Deep learning aids prediction of IDH mutation status from histopathological whole slide images (WSI)☆11Jan 10, 2023Updated 3 years ago
- Quality control pipeline for human exome/genome cohorts☆10Oct 23, 2026Updated 2 weeks ago
- Burden testing against public controls☆51Feb 27, 2024Updated 2 years ago
- Processing, quality control and analysis of GAM datsets☆10Jun 13, 2023Updated 3 years ago
- Probabilistic PCA which is applicable also on data with missing values. Missing value estimation is typically better than NIPALS but also…☆16Jun 13, 2019Updated 7 years ago
- ☆13Nov 28, 2018Updated 7 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- DeepSAP repository for documentation and supplemental data☆11Jul 31, 2026Updated 3 months ago
- SUPBUB is a tool that, in linear time, finds out superbubbles(special graph-structures) in a directed graph.☆12Sep 19, 2019Updated 7 years ago
- ☆13Jan 23, 2020Updated 6 years ago
- A high throughput automated drug discovery pipeline.☆30Mar 16, 2018Updated 8 years ago
- The repository keeps the files for an IPython notebook on about how to make a simple genome assembler using python☆30May 10, 2018Updated 8 years ago
- A tool that lauches docker jobs on Amazon EC2.☆10May 7, 2019Updated 7 years ago
- ☆11Feb 26, 2025Updated last year
- ☆11Aug 17, 2022Updated 4 years ago
- MAW: a suite on the computation and application of Minimal Absent Words☆18Nov 1, 2021Updated 5 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- scripts and data for the comparison found at http://sjcockell.me/2015/05/18/alignment-free-transcriptome-quantification/☆10May 24, 2015Updated 11 years ago
- Nextflow Pipelines☆10Aug 15, 2026Updated 2 months ago
- 7C: Computational Chromosome Conformation Capture by Correlation of ChIP-seq at CTCF motifs☆13Oct 15, 2025Updated last year
- An R package for performing association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using STAARpipeline☆80Oct 2, 2026Updated last month
- cfDNA analysis workflow☆23Jun 15, 2023Updated 3 years ago
- Fast calculations of linkage-disequilibrium in large-scale human cohorts☆44Nov 9, 2019Updated 6 years ago
- Processing and plotting tools for genomics data☆21Oct 29, 2026Updated last week