Alternatives and similar repositories for tractability_pipeline_v2

Users that are interested in tractability_pipeline_v2 are comparing it to the libraries listed below

• AstraZeneca / StarGazer
  StarGazer is a tool designed for rapidly assessing drug repositioning opportunities. It combines multi-source, multi-omics data with a no…
  ☆35Updated 2 years ago
• sdecesco / targetDB
  TargetDB is a tool to quickly querry multiple publicly available databases and provide an integrated view of the information available ab…
  ☆32Updated last year
• PaccMann / paccmann_predictor
  PyTorch implementation of bimodal neural networks for drug-cell (pharmarcogenomics) and drug-protein (proteochemometrics) interaction pre…
  ☆54Updated 3 months ago
• dmnfarrell / epitopepredict
  Python package and command line tool for epitope prediction
  ☆52Updated last year
• hgbrian / biocolabs
  a collection of colabs useful for molecular biology
  ☆31Updated last year
• brineylab / abstar
  VDJ assignment and antibody sequence annotation. Scalable from a single sequence to billions of sequences.
  ☆44Updated 3 months ago
• frankligy / DeepImmuno
  Deep-learning empowered prediction and generation of immunogenic epitopes for T cell immunity
  ☆73Updated 2 years ago
• astrazeneca-cgr-publications / DrugnomeAI-release
  ☆18Updated last year
• mims-harvard / SPECTRA
  SPECTRA: Spectral framework for evaluation of biomedical AI models
  ☆41Updated 8 months ago
• ViennaRNA / RNAsketch
  Python wrapper to design RNA molecules using RNAblueprint, RNARedPrint and for energy evaluations ViennaRNA, Hotknots, pKiss and Nupack.
  ☆21Updated 7 years ago
• fjossinet / RNA-Science-Toolbox
  A platform to do RNA science
  ☆27Updated 4 years ago
• SuLab / DrugMechDB
  A database of paths that represent the mechanism of action from a drug to a disease in an indication.
  ☆65Updated last week
• oxpig / saab_plus
  ☆26Updated 5 years ago
• dmis-lab / moable
  Predicting mechanism of action of novelcompounds using compound structure andtranscriptomic signature co-embedding
  ☆14Updated 2 years ago
• GreiffLab / manuscript_ab_epitope_interaction
  ☆25Updated last year
• kusterlab / curve_curator
  Analysis platform for large-scale dose-dependent data
  ☆26Updated last month
• dhimmel / lincs
  Library of Integrated Cellular Signatures L1000
  ☆31Updated 3 years ago
• djwooten / synergy
  Python library for calculting synergy of drug combinations using several drug synergy frameworks
  ☆36Updated last year
• dphansti / CORAL
  ☆29Updated 3 years ago
• siheming / mspypeline
  Package to analyze Mass Spec Data
  ☆12Updated 2 years ago
• opentargets-archive / opentargets-py
  Python client for the Open Targets REST API at targetvalidation.org
  ☆25Updated 2 months ago
• Faezov / PDBrenum
  ☆30Updated 6 months ago
• wikipathways / pywikipathways
  Python Client Package for WikiPathways
  ☆21Updated last month
• mims-harvard / ProCyon
  ProCyon: A multimodal foundation model for protein phenotypes
  ☆49Updated 2 months ago
• Superzchen / iFeatureOmega-CLI
  iFeatureOmega is a comprehensive platform for generating, analyzing and visualizing more than 170 representations for biological sequence…
  ☆32Updated 2 years ago
• eternagame / DegScore
  Arnie-based DegScore tool.
  ☆27Updated 3 years ago
• teese / eccpy
  ECCpy is a program for EC50 calculation in python.
  ☆44Updated 2 years ago
• cusbg / MolArt
  MOLeculAR structure annoTator
  ☆33Updated last year
• pth1993 / DeepCE
  A deep learning framework for high-throughput mechanism-driven phenotype screening
  ☆51Updated 4 years ago
• Rostlab / bindPredict
  Prediction of binding residues for metal ions, nucleic acids, and small molecules.
  ☆35Updated 2 months ago