Alternatives and similar repositories for tractability_pipeline_v2:

Users that are interested in tractability_pipeline_v2 are comparing it to the libraries listed below

• astrazeneca-cgr-publications / DrugnomeAI-release
  ☆17Updated 7 months ago
• hgbrian / biocolabs
  a collection of colabs useful for molecular biology
  ☆30Updated last year
• ViennaRNA / RNAsketch
  Python wrapper to design RNA molecules using RNAblueprint, RNARedPrint and for energy evaluations ViennaRNA, Hotknots, pKiss and Nupack.
  ☆20Updated 6 years ago
• sdecesco / targetDB
  TargetDB is a tool to quickly querry multiple publicly available databases and provide an integrated view of the information available ab…
  ☆32Updated 10 months ago
• djwooten / synergy
  Python library for calculting synergy of drug combinations using several drug synergy frameworks
  ☆35Updated 6 months ago
• frankligy / DeepImmuno
  Deep-learning empowered prediction and generation of immunogenic epitopes for T cell immunity
  ☆68Updated 2 years ago
• mgalardini / pdb2uniprot
  Convert PDB residues to their Uniprot equivalents
  ☆17Updated 5 years ago
• AstraZeneca / StarGazer
  StarGazer is a tool designed for rapidly assessing drug repositioning opportunities. It combines multi-source, multi-omics data with a no…
  ☆35Updated last year
• dmnfarrell / epitopepredict
  Python package and command line tool for epitope prediction
  ☆51Updated 9 months ago
• fjossinet / RNA-Science-Toolbox
  A platform to do RNA science
  ☆27Updated 4 years ago
• multimeric / Unipressed
  Comprehensive Python client for the Uniprot REST API
  ☆49Updated 8 months ago
• kusterlab / curve_curator
  Analysis platform for large-scale dose-dependent data
  ☆25Updated 2 weeks ago
• Rostlab / ConSurf
  Evolutionary conservation estimation of residues or nucleotides
  ☆41Updated 3 years ago
• schumacherlab / STAPLER
  STAPLER (Shared TCR And Peptide Language bidirectional Encoder Representations from transformers) is a language model that uses a joint T…
  ☆26Updated last week
• Faezov / PDBrenum
  ☆28Updated last year
• dosorio / Peptides
  An R package to calculate indices and theoretical physicochemical properties of peptides and protein sequences.
  ☆85Updated last year
• liulab-dfci / MAPD
  Model-based Analysis of Protein Degradability
  ☆10Updated 3 years ago
• GreiffLab / manuscript_ab_epitope_interaction
  ☆25Updated last year
• PaccMann / paccmann_predictor
  PyTorch implementation of bimodal neural networks for drug-cell (pharmarcogenomics) and drug-protein (proteochemometrics) interaction pre…
  ☆51Updated 11 months ago
• mims-harvard / SPECTRA
  SPECTRA: Spectral framework for evaluation of biomedical AI models
  ☆38Updated last month
• MIDIfactory / AlphaFastPPi
  Fast AlphaFold-Multimer based pipeline for Protein-Protein Interaction (PPI) screening
  ☆36Updated 7 months ago
• patrickbryant1 / SpeedPPI
  Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning
  ☆83Updated last year
• sbl-sdsc / mmtf-genomics
  Methods for mapping genomic data onto 3D protein structure.
  ☆28Updated 2 years ago
• andrewguy / biostructmap
  A Python package for mapping sequence aligned data onto protein structures
  ☆35Updated 3 years ago
• kWeissenow / MutAmore
  Rendering protein mutation movies from predicted 3D structures
  ☆20Updated last year
• haiyuan-yu-lab / PIONEER
  ☆25Updated 4 months ago
• oxpig / saab_plus
  ☆25Updated 5 years ago
• prehensilecode / alphafold_singularity
  Singularity recipe for AlphaFold
  ☆36Updated 5 months ago
• chenhcs / FRoGS
  Functional Embedding of Gene Signatures
  ☆43Updated last year
• kadiliissaar / DeePhase
  DeePhase predictor of homotypic liquid-liquid phase separation of proteins & the code associated with the paper "Learning the molecular g…
  ☆16Updated 3 years ago