yuabrahamliu / CWGCNA
CWGCNA is an R package to perform causal inference from the WGCNA framework.
☆14Updated 6 months ago
Alternatives and similar repositories for CWGCNA:
Users that are interested in CWGCNA are comparing it to the libraries listed below
- Phenome Exome Association and Correlation Of Key phenotypes☆28Updated 3 years ago
- Main repository for Drews et al. (Nature, 2022)☆39Updated last year
- TWAS-pipeline☆22Updated 4 years ago
- R package for tissue-specific gene enrichment☆13Updated 3 years ago
- ☆40Updated 7 years ago
- Machine learning algorithm to predict biological pathway relationships based on functional genomics networks☆20Updated 6 years ago
- documentation for trackViewer☆29Updated 5 years ago
- A neoantigen calling pipeline begins from variants record file (MAF) (Not maintain now)☆29Updated 5 years ago
- ☆46Updated 5 months ago
- TIGS (Tumor Immunogenicity Score) project https://doi.org/10.7554/eLife.49020☆31Updated 3 years ago
- workshop website on readthedocs☆19Updated 2 months ago
- Kidney Epigenome and Transcriptome-based multi-stage Prioritization☆17Updated 2 years ago
- Analysis and visualization of RNA-Seq results☆29Updated 4 months ago
- Pipeline to analyze long-read mRNA isoforms and ORF products sequenced in breast cancer using PacBio Single-Molecule technology.☆14Updated 2 years ago
- R package to calculate the Aneuploidy Score from Chromosome Arm-level SCNAs/Aneuploidies (CAAs) as outlined and expanded by Shukla et al.…☆16Updated 4 years ago
- A tool kit for dissecting cancer evolution from multi-region derived tumor biopsies via somatic mutations☆36Updated 3 years ago
- ☆10Updated 5 months ago
- R package for testing and visualizing gene list overlaps☆18Updated 8 years ago
- scripts for the integrating ATAC-seq, RNA-seq and CHi-C paper☆24Updated 2 years ago
- This repo contains the code necessary to reproduce the clusters found in "The Immune Landscape of Cancer".☆18Updated 5 years ago
- Short Time-series Expression Miner (STEM) and Dynamic Regulatory Events Miner (DREM)☆20Updated 4 years ago
- VennDetail: a bioconductor package for VennDiagram visualization and details extraction☆29Updated last week
- ☆17Updated 3 years ago
- ☆16Updated last year
- The MBatch R package and Docker image are designed to help assess and correct for batch effects.☆16Updated 10 months ago
- Multiscale embedded gene co-expression network analysis☆51Updated last year
- Motif manipulation functions for R.☆28Updated this week
- Openbiox 翻译小组发起并维护的优秀 Workflow 翻译项目☆27Updated 5 years ago
- ☆27Updated last year
- ☆21Updated 3 months ago