yuabrahamliu / CWGCNA
CWGCNA is an R package to perform causal inference from the WGCNA framework.
☆14Updated 4 months ago
Alternatives and similar repositories for CWGCNA:
Users that are interested in CWGCNA are comparing it to the libraries listed below
- 🧬 Gene analysis toolkit based on R☆56Updated 2 months ago
- The MBatch R package and Docker image are designed to help assess and correct for batch effects.☆16Updated 9 months ago
- This repo contains the code necessary to reproduce the clusters found in "The Immune Landscape of Cancer".☆18Updated 5 years ago
- Analysis and visualization of RNA-Seq results☆28Updated 3 months ago
- documentation for trackViewer☆29Updated 5 years ago
- Main repository for Drews et al. (Nature, 2022)☆39Updated last year
- ☆46Updated 4 months ago
- TIGS (Tumor Immunogenicity Score) project https://doi.org/10.7554/eLife.49020☆31Updated 3 years ago
- Phenome Exome Association and Correlation Of Key phenotypes☆28Updated 3 years ago
- ☆24Updated last year
- Bayesian network plot for the enrichment analysis results☆64Updated 5 months ago
- Multiscale embedded gene co-expression network analysis☆51Updated last year
- Openbiox 翻译小组发起并维护的优秀 Workflow 翻译项目☆27Updated 5 years ago
- R package to calculate the Aneuploidy Score from Chromosome Arm-level SCNAs/Aneuploidies (CAAs) as outlined and expanded by Shukla et al.…☆16Updated 4 years ago
- R package for testing and visualizing gene list overlaps☆18Updated 8 years ago
- ☆21Updated 2 months ago
- ☆40Updated 6 years ago
- Co-expression network management based on WGCNA + k-means☆18Updated 3 years ago
- ☆20Updated 2 years ago
- VennDetail: a bioconductor package for VennDiagram visualization and details extraction☆29Updated 3 years ago
- Comprehensive analysis of small RNA sequencing data☆31Updated 9 months ago
- ☆17Updated 2 weeks ago
- Process m6A/MeRIP-seq data in a single or batch job mode☆20Updated 4 years ago
- Extract Sequence from Genome According to Annotation File☆32Updated 2 months ago
- R package☆22Updated last year
- Motif manipulation functions for R.☆28Updated 4 months ago
- Machine learning algorithm to predict biological pathway relationships based on functional genomics networks☆20Updated 6 years ago
- An integrated platform for modeling gene-regulatory dynamics and networks☆31Updated 8 months ago
- scripts for the integrating ATAC-seq, RNA-seq and CHi-C paper☆23Updated 2 years ago
- Enrichment Networks for Pathway Enrichment Analysis☆43Updated last year