Alternatives and similar repositories for Enrichment-Pipeline

Users that are interested in Enrichment-Pipeline are comparing it to the libraries listed below

• evanpeikon / scRNA-seq-guide
  A DIY Guide To Single-Cell RNA-Sequencing Analysis
  ☆30Updated 7 months ago
• pinellolab / CRISPResso2
  Analysis of deep sequencing data for rapid and intuitive interpretation of genome editing experiments
  ☆326Updated 2 weeks ago
• evanpeikon / Bioinformatics_Toolkit
  A growing collection of bioinformatics tutorials, project guides, tools, and articles I’ve developed to make bioinformatics more accessib…
  ☆440Updated 3 weeks ago
• JoshuaChou2018 / AutoBA
  An AI Agent for Fully Automated Multi-omic Analyses
  ☆200Updated last year
• ArcInstitute / arc-virtual-cell-atlas
  Arc Virtual Cell Atlas
  ☆456Updated 6 months ago
• ArcInstitute / state
  State is a machine learning model that predicts cellular perturbation response across diverse contexts
  ☆459Updated 2 weeks ago
• songlab-cal / gpn
  Genomic Pre-trained Network
  ☆309Updated last week
• Genentech / BRAID
  BRAID is a department within Genentech dedicated to advancing biological and clinical sciences through artificial intelligence.
  ☆216Updated 3 months ago
• Genentech / gReLU
  gReLU is a python library to train, interpret, and apply deep learning models to DNA sequences.
  ☆303Updated last month
• raphaelmourad / LLM-for-genomics-training
  Tutorial on large language models for genomics
  ☆259Updated 5 months ago
• NVIDIA / bionemo-framework
  BioNeMo Framework: For building and adapting AI models in drug discovery at scale
  ☆592Updated this week
• evanpeikon / scRNA_Prediction
  Predictive Modeling of Gene Expression in Skeletal Muscle Using scRNA-seq
  ☆10Updated last year
• Multiomics-Analytics-Group / course_protein_language_modeling
  ☆45Updated 3 months ago
• calico / borzoi
  RNA-seq prediction with deep convolutional neural networks.
  ☆206Updated 3 months ago
• bionumpy / bionumpy
  Python library for array programming on biological datasets. Documentation available at: https://bionumpy.github.io/bionumpy/
  ☆288Updated 5 months ago
• LinearDesignSoftware / LinearDesign
  The LinearDesign mRNA design software.
  ☆195Updated last year
• google-deepmind / alphagenome
  This API provides programmatic access to the AlphaGenome model developed by Google DeepMind.
  ☆1,319Updated this week
• google / deepsomatic
  DeepSomatic is an analysis pipeline that uses a deep neural network to call somatic variants from tumor-normal and tumor-only sequencing …
  ☆279Updated last month
• Illumina / SpliceAI
  A deep learning-based tool to identify splice variants
  ☆470Updated 4 months ago
• ViennaRNA / ViennaRNA
  The ViennaRNA Package
  ☆371Updated 4 months ago
• idekerlab / DrugCell
  A visible neural network model for drug response prediction
  ☆149Updated 2 years ago
• google-deepmind / alphamissense
  ☆594Updated last year
• evanpeikon / PPI_Network_Analysis
  Mapping DEGs to PPI Networks, Identifying Network Hubs and Highly Connected Proteins, and Simulating Genetic Circuits. An End-to-End DIY …
  ☆24Updated 10 months ago
• jbkinney / logomaker
  Software for the visualization of sequence-function relationships
  ☆206Updated 5 months ago
• LucaOne / LucaOne
  The resources of LucaOne, including: the model code, training scripts, embedding inference code, and trained checkpoints.
  ☆322Updated last week
• nf-core / sarek
  Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
  ☆503Updated this week
• jkobject / geneformer
  ☆84Updated 3 months ago
• SysBioChalmers / Human-GEM
  The generic genome-scale metabolic model of Homo sapiens
  ☆123Updated 2 months ago
• cong-lab / crispr-gpt-pub
  CRISPSR-GPT LLM Agent Public Welcome Page
  ☆122Updated 3 months ago
• helicalAI / helical
  A framework for state-of-the-art pre-trained bio foundation models on genomics and transcriptomics modalities.
  ☆173Updated last week