visual analysis of your VCF files
☆40Dec 3, 2022Updated 3 years ago
Alternatives and similar repositories for plot-VCF
Users that are interested in plot-VCF are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Scripts used to perform analyses in Rice et al. (2023)☆16Dec 28, 2023Updated 2 years ago
- Documentation for vcfR☆11Feb 23, 2026Updated 2 months ago
- ☆12Feb 16, 2026Updated 2 months ago
- ☆18Jan 14, 2026Updated 3 months ago
- Genome Assembly Validation via Inter-SUNK distances in ONT reads☆15Feb 20, 2023Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- plot genome alignment synteny☆20May 25, 2020Updated 5 years ago
- A genome annotation pipeline that use short and long sequencing reads alignments from animal genomes☆30Apr 10, 2024Updated 2 years ago
- CLfinder-OrthNet, a pipeline to encode orthologs from multiple genomes and their evolutionary history into networks (OrthNets) based on c…☆10Jun 9, 2022Updated 3 years ago
- Set of script for the paper on the cattle graph genome☆14Jan 10, 2023Updated 3 years ago
- ☆28Mar 30, 2026Updated last month
- A python script for finding telomeric repeats (TTAGGG/CCCTAA) in FASTA files☆37Jun 6, 2022Updated 3 years ago
- TELR is a fast non-reference transposable element detector from long read sequencing data.☆35Jul 27, 2023Updated 2 years ago
- Differential quantification of alternative splicing events on spliced pangenome graphs☆15Jan 30, 2026Updated 3 months ago
- Custom tools to 'facilitate' BioNano Genomics data analysis☆34Oct 22, 2018Updated 7 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆11Sep 16, 2021Updated 4 years ago
- Novo&Stitch is a genome assembly reconciliation tool based on optical map.☆10Oct 21, 2019Updated 6 years ago
- python plotly Circos from VCF☆42Jun 20, 2024Updated last year
- A tutorial on structural variant calling for short read sequencing data☆43Oct 24, 2024Updated last year
- VCF Observer is a VCF file analysis, comparison, and visualization tool.☆20Jan 3, 2025Updated last year
- RPHAST: Phylogenetic Analysis with Space/Time Models in R☆13Nov 25, 2024Updated last year
- Genome alignment and synteny plots☆34Mar 24, 2026Updated last month
- Powerful statistics for VCF files☆73Nov 16, 2025Updated 5 months ago
- Accessing AlphaMissense Data Resources in R☆13Nov 26, 2025Updated 5 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Quantitative proteomics workflow☆15Sep 30, 2022Updated 3 years ago
- ☆36Mar 31, 2026Updated last month
- ☆11Feb 20, 2024Updated 2 years ago
- Annotate Olfactory receptor CDS from genome☆11Apr 29, 2023Updated 3 years ago
- building a human pangenome from the HPRCy1v2 genbank accessioned assemblies☆15Feb 13, 2023Updated 3 years ago
- AlfaPang builds pangenome graphs without alignments or references.☆15Nov 7, 2025Updated 5 months ago
- faster haplotype-based admixture inference and dating software☆10Nov 25, 2025Updated 5 months ago
- FFT cross-correlation based synteny aligner, (re)designed to make full use of parallel computing☆45Dec 21, 2021Updated 4 years ago
- Scripts that used in our chicken T2T manuscript.