visual analysis of your VCF files
☆40Dec 3, 2022Updated 3 years ago
Alternatives and similar repositories for plot-VCF
Users that are interested in plot-VCF are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Scripts used to perform analyses in Rice et al. (2023)☆16Dec 28, 2023Updated 2 years ago
- Documentation for vcfR☆11Feb 23, 2026Updated 2 months ago
- ☆12Feb 16, 2026Updated 3 months ago
- ☆18Apr 28, 2026Updated 3 weeks ago
- Genome Assembly Validation via Inter-SUNK distances in ONT reads☆15Feb 20, 2023Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- plot genome alignment synteny☆20May 25, 2020Updated 5 years ago
- A genome annotation pipeline that use short and long sequencing reads alignments from animal genomes☆30Apr 10, 2024Updated 2 years ago
- CLfinder-OrthNet, a pipeline to encode orthologs from multiple genomes and their evolutionary history into networks (OrthNets) based on c…☆10Jun 9, 2022Updated 3 years ago
- Set of script for the paper on the cattle graph genome☆14Jan 10, 2023Updated 3 years ago
- ☆28Mar 30, 2026Updated last month
- A python script for finding telomeric repeats (TTAGGG/CCCTAA) in FASTA files☆37Jun 6, 2022Updated 3 years ago
- TELR is a fast non-reference transposable element detector from long read sequencing data.☆35Jul 27, 2023Updated 2 years ago
- Differential quantification of alternative splicing events on spliced pangenome graphs☆16Jan 30, 2026Updated 3 months ago
- ☆11Sep 16, 2021Updated 4 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Custom tools to 'facilitate' BioNano Genomics data analysis☆34Oct 22, 2018Updated 7 years ago
- Novo&Stitch is a genome assembly reconciliation tool based on optical map.☆10Oct 21, 2019Updated 6 years ago
- python plotly Circos from VCF☆42Jun 20, 2024Updated last year
- A tutorial on structural variant calling for short read sequencing data☆43Oct 24, 2024Updated last year
- VCF Observer is a VCF file analysis, comparison, and visualization tool.☆22Jan 3, 2025Updated last year
- RPHAST: Phylogenetic Analysis with Space/Time Models in R☆13Nov 25, 2024Updated last year
- Genome alignment and synteny plots☆34Mar 24, 2026Updated last month
- Powerful statistics for VCF files☆73Nov 16, 2025Updated 6 months ago
- Accessing AlphaMissense Data Resources in R☆13Nov 26, 2025Updated 5 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Quantitative proteomics workflow☆16Sep 30, 2022Updated 3 years ago
- ☆11Feb 20, 2024Updated 2 years ago
- ☆36Mar 31, 2026Updated last month
- Annotate Olfactory receptor CDS from genome☆11Apr 29, 2023Updated 3 years ago
- building a human pangenome from the HPRCy1v2 genbank accessioned assemblies☆15Feb 13, 2023Updated 3 years ago
- AlfaPang builds pangenome graphs without alignments or references.☆16Nov 7, 2025Updated 6 months ago
- faster haplotype-based admixture inference and dating software☆10Nov 25, 2025Updated 5 months ago
- FFT cross-correlation based synteny aligner, (re)designed to make full use of parallel computing☆45Dec 21, 2021Updated 4 years ago
- Scripts that used in our chicken T2T manuscript.☆22Jan 14, 2026Updated 4 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Detecting transposable element invasions without repeat library. Detects also horizontal transfer events and endogenized viruses. All you…☆17Nov 25, 2024Updated last year
- A python command line tool to generate modbed files for visualization on WashU Epigenome Browser☆11Dec 10, 2025Updated 5 months ago
- The complete sequence of a Chinese individual☆12Oct 8, 2024Updated last year
- ☆32Feb 14, 2026Updated 3 months ago
- Renames headers in FASTA file☆13Jun 28, 2017Updated 8 years ago
- Analysis pipeline to model tumour clonal evolution from WGS data (driver annotation, quality control of copy number calls, subclonal and …☆20May 5, 2026Updated 2 weeks ago
- DNA methylation analysis downstream to Nanopolish for Oxford Nanopore DNA sequencing datasets☆30Jul 3, 2023Updated 2 years ago