MarksLab-DasLab / RNAGymLinks
☆24Updated 3 months ago
Alternatives and similar repositories for RNAGym
Users that are interested in RNAGym are comparing it to the libraries listed below
Sorting:
- RNA Multiple Sequence Alignment☆45Updated 2 years ago
- Inference code for PoET: A generative model of protein families as sequences-of-sequences☆80Updated last year
- ☆115Updated 2 months ago
- Efficient implementatin of ESM family.☆74Updated last month
- A collection of tasks to probe the effectiveness of protein sequence representations in modeling aspects of protein design☆106Updated last year
- ☆110Updated 3 years ago
- Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"☆119Updated 6 months ago
- Aligning protein generative models with experimental fitness☆107Updated 2 months ago
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆71Updated 3 months ago
- ☆70Updated 3 years ago
- Unconstrained lattice antibody-antigen bindings generator☆111Updated last year
- MSA Transformer reproduction code☆85Updated 3 years ago
- ☆36Updated 8 months ago
- ☆107Updated last year
- Nucleic Acids Research 2024:RNA-MSM model is an unsupervised RNA language model based on multiple sequences that outputs both embedding a…☆66Updated last year
- ☆59Updated 2 years ago
- Public repository describing training and testing of AntiBERTa.☆61Updated 2 years ago
- A dataset for training and benchmarking deep learning models for RNA structure prediction☆58Updated last month
- Results and data from the pilot round of the Protein Engineering Tournament☆30Updated 6 months ago
- Dataset and package for working with protein-protein interactions in 3D☆96Updated 5 months ago
- Joint embedding of protein sequence and structure with discrete and continuous compressions of protein folding model latent spaces. http:…☆138Updated 5 months ago
- Finetuning ProGen2 protein language model for generation of protein sequences from selected protein families.☆77Updated 8 months ago
- Contrastive fitness learning: Reprogramming protein language models for low-N learning of protein fitness landscape☆31Updated last year
- A machine-learning package for navigating combinatorial protein fitness landscapes.☆129Updated 3 years ago
- Protein language model trained on coding DNA☆50Updated 11 months ago
- Official repository for discrete Walk-Jump Sampling (dWJS)☆58Updated last year
- Gibbs sampling for generating protein sequences☆56Updated 8 months ago
- Supporting code for our paper "Protein Sequence Modelling with Bayesian Flow Networks"☆46Updated 7 months ago
- ☆101Updated last week
- ☆35Updated last year