Alternatives and similar repositories for BiocSwirl

Users that are interested in BiocSwirl are comparing it to the libraries listed below

• Bioconductor / BiocWorkshops
  2018 Bioconductor Workshops
  ☆76Updated 6 years ago
• widdowquinn / ten_great_papers
  Ten great papers for wet lab biologists starting out in computational biology
  ☆53Updated 6 years ago
• crazyhottommy / scripts-general-use
  ☆16Updated 8 years ago
• datacarpentry / wrangling-genomics
  Data Wrangling and Processing for Genomics
  ☆72Updated last week
• Bioconductor / GenomicRanges
  Representation and manipulation of genomic intervals
  ☆46Updated 3 weeks ago
• biodatascience / compbio_src
  Introduction to Computational Biology - source Rmarkdown files
  ☆66Updated last year
• lindsayrutter / bigPint
  Bioconductor package that makes BIG data pint-sized.
  ☆21Updated last year
• thelovelab / tximeta
  Transcript quantification import with automatic metadata detection
  ☆67Updated last week
• brennanpincardiff / drawProteins
  Creating package to draw proteins from Uniprot API
  ☆35Updated last year
• js2264 / tidyCoverage
  ☆23Updated last week
• drpowell / degust
  An interactive web-tool for RNA-seq analysis
  ☆70Updated 2 weeks ago
• UMMS-Biocore / debrowser
  Differential Count Data Analysis Toolbox
  ☆61Updated last year
• brentp / 450k-analysis-guide
  A Practical (And Opinionated) Guide To Analyzing 450K Data
  ☆35Updated 11 years ago
• sk-sahu / sig-bio-shiny
  A standalone interactive application for detecting biological significance on a set of genes
  ☆40Updated 4 years ago
• mikelove / preNivolumabOnNivolumab
  EDA, QC, and DESeq2 / edgeR analysis of 109 RNA-seq samples of immunotherapy treatment
  ☆55Updated 2 years ago
• ctb / 2019-snakemake-ucdavis
  Intro to workflows for efficient automated data analysis, using snakemake.
  ☆32Updated 6 years ago
• ScienceParkStudyGroup / rna-seq-lesson
  A Carpentries-style lesson on RNA-Sequencing
  ☆19Updated 2 years ago
• lpantano / DEGreport
  Create a cromphensive report of DEG list coming from any analysis of RNAseq data
  ☆26Updated 2 months ago
• WilsonSayresLab / BioinformaticsIntroduction
  ☆28Updated 5 years ago
• stevekm / Bioinformatics
  Bioinformatics analysis scripts, workflows, general code examples
  ☆54Updated 4 years ago
• datacarpentry / genomics-workshop
  Genomics Workshop Overview
  ☆47Updated last week
• andrewparkermorgan / argyle
  An R package for import, QC and analysis of Illumina Infinium genotyping arrays
  ☆35Updated 7 years ago
• krishnanlab / teaching
  Courses & workshops led by members of the Krishnan Lab.
  ☆23Updated 3 months ago
• datacarpentry / organization-genomics
  Project Organization and Management for Genomics
  ☆25Updated last week
• schatzlab / scikit-ribo
  Accurate estimation and robust modelling of translation dynamics at codon resolution
  ☆21Updated 8 years ago
• G3viz / g3viz
  Lollipop-diagram to interactively visualize genetic mutations
  ☆33Updated last year
• stephenturner / mergelanes
  Merge fastq files split over lanes
  ☆20Updated 7 years ago
• CapraLab / lab-manuscript-template
  An academic manuscript template with writing tips in both LaTeX and MS Word format generated by the Capra Lab (2/2022)
  ☆21Updated 2 years ago
• hbctraining / rnaseq_overview
  Short course describing the considerations for a successful RNA-seq experiment
  ☆19Updated 3 years ago
• griffithlab / genviz.org
  Genomic data interpretation and visualization Workshop
  ☆21Updated last month