Oshlack / MethylationAnalysisWorkflowLinks
A cross-package Bioconductor workflow for analysing methylation array data
☆11Updated 8 years ago
Alternatives and similar repositories for MethylationAnalysisWorkflow
Users that are interested in MethylationAnalysisWorkflow are comparing it to the libraries listed below
Sorting:
- A 450k tutorial in the form of an R package☆12Updated 9 years ago
- Workshop on tidytranscriptomics: Performing tidy transcriptomics analyses with tidybulk, tidyverse and tidyheatmap☆26Updated 4 years ago
- A utility to map bisulfite sequencing data to the Illumina 450K methylation CpG set☆17Updated 9 years ago
- Download, integration and visualizations of the variety & volume of TCGA data.☆51Updated 2 years ago
- Source code for ScanGEO Shiny App☆15Updated 3 years ago
- Efficient algorithms for analyzing DNA methylation data.☆57Updated 3 months ago
- An interactive web portal for exploring immuno-oncology data. This repo now superseded by iatlas-app☆49Updated 4 years ago
- Code from UVA/Cville R Users Group Meetups☆25Updated 6 years ago
- Computational Suite for Bioinformaticians and Biologists (CSBB) is a RShiny application developed with an intention to empower researcher…☆36Updated 2 years ago
- Materials for Module 2 of the SISBID Workshop, Visualization of Biomedical Big Data☆26Updated 8 years ago
- The START App: R Shiny Transcriptome Analysis Resource Tool☆89Updated 4 years ago
- Interactive Differential Expression AnaLysis - DE made accessible and reproducible☆29Updated 3 months ago
- Standard regression functions in R enabled for parallel processing over large data-frames.☆38Updated last year
- Class materials for the NIH HPC snakemake class☆15Updated 10 months ago
- Functional enrichment analysis of high-throughput omics data☆20Updated 6 months ago
- Marker gene profile estimation method used in NeuroExpresso manuscript☆14Updated 6 years ago
- ☆22Updated 3 years ago
- Cell type deconvolution from high-throughput gene expression profiling experiments.☆31Updated 4 years ago
- My notes/usage examples for various Bioconductor packages☆15Updated 8 years ago
- Public data resources and Bioconductor: The goal of this workshop is to introduce Bioconductor packages for finding, accessing, and using…☆14Updated 2 months ago
- See: https://www.iscb.org/ismb2018/3511#am1☆18Updated 6 years ago
- A collection of functions for working with DNA methylation microarrays (quality control, pre-processing, LC estimation, ...)☆26Updated last week
- A Practical (And Opinionated) Guide To Analyzing 450K Data☆35Updated 10 years ago
- Project Website:☆53Updated last month
- Intro to R and RStudio for Genomics☆30Updated last week
- Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects☆44Updated 2 weeks ago
- An R package to plot interactive three-way differential expression analysis☆38Updated last year
- A Shiny App for Interactive Multi-OMICS Cancer Data Visualization and analysis☆21Updated last year
- 2018 Bioconductor Workshops☆76Updated 6 years ago
- ☆53Updated this week