btmonier / vidgerLinks
Make rapid visualizations of RNA-seq data in R
☆19Updated 6 years ago
Alternatives and similar repositories for vidger
Users that are interested in vidger are comparing it to the libraries listed below
Sorting:
- Relative Abundance of Transcripts: An R package for the detection of Differential Transcript isoform Usage.☆34Updated 3 years ago
- A small R package to make sequencing read coverage plots in R.☆39Updated 3 years ago
- Interactive R package to quantify, analyse and visualise alternative splicing☆37Updated this week
- DriverPower☆26Updated 6 months ago
- Provides Quality Control of sequencing samples by deducing if there is batch effect and adjusts for it.☆35Updated last year
- Flexible Bayesian inference of mutational signatures☆35Updated 2 years ago
- Tutorial to reproduce the analysis of Peixoto et al. (2015)☆9Updated 9 years ago
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆43Updated 3 years ago
- An R for fast and flexible DNA methylation analysis☆32Updated last month
- Differential expression and allelic analysis, nonparametric statistics☆29Updated 7 months ago
- ☆13Updated 7 years ago
- ☆33Updated 3 years ago
- Software Package for Transcription Factor Binding Site (TFBS) Analysis☆29Updated 4 months ago
- a Shiny/R application to view and annotate copy number variations☆28Updated 2 years ago
- An R interface to the MEME Suite☆52Updated last month
- OUTRIDER: OUTlier in RNA-seq fInDER is an R-based framework to find aberrantly expressed genes in RNA-seq data☆53Updated last week
- Merge fastq files split over lanes☆20Updated 7 years ago
- Tool for parsing outputs from fusion detection tools. Part of a nf-core/rnafusion pipeline. Checkout a live demo at https://matq007.githu…☆27Updated last month
- deepStats: a stastitical toolbox for deeptools and genomic signals☆34Updated 4 years ago
- A set of tools to annotate VCF files with expression and readcount data☆29Updated 5 months ago
- 📊 An R package of RNA-seq workflow☆16Updated 3 years ago
- Sashimi plots for RNA-seq data using detected transcripts☆29Updated 4 months ago
- highly-efficient & lightweight mutation signature matrix aggregation☆18Updated 3 years ago
- AnaLysis routines for ePigenomicS data - 🏫 Bioconductor project☆16Updated 2 years ago
- An R Package based on JavaScript libraries for Visualization of Interactive Circos Plot☆28Updated 3 years ago
- ☆21Updated 11 months ago
- Genomic data interpretation and visualization Workshop☆21Updated 2 weeks ago
- Glimma R package☆50Updated 11 months ago
- Integrative analysis of structural variations.☆40Updated last year
- Fluff is a Python package that contains several scripts to produce pretty, publication-quality figures for next-generation sequencing exp…☆70Updated last year