btmonier / vidgerLinks
Make rapid visualizations of RNA-seq data in R
☆19Updated 6 years ago
Alternatives and similar repositories for vidger
Users that are interested in vidger are comparing it to the libraries listed below
Sorting:
- A small R package to make sequencing read coverage plots in R.☆39Updated 3 years ago
- Relative Abundance of Transcripts: An R package for the detection of Differential Transcript isoform Usage.☆34Updated 3 years ago
- Code for differential splicing comparison paper (Soneson, Matthes, et al.)☆20Updated 9 years ago
- 📊 An R package of RNA-seq workflow☆16Updated 3 years ago
- Provides Quality Control of sequencing samples by deducing if there is batch effect and adjusts for it.☆35Updated last year
- Flexible Bayesian inference of mutational signatures☆35Updated 2 years ago
- R package wrapping bedtools☆41Updated 3 months ago
- Tool for parsing outputs from fusion detection tools. Part of a nf-core/rnafusion pipeline. Checkout a live demo at https://matq007.githu…☆27Updated last month
- An R Package based on JavaScript libraries for Visualization of Interactive Circos Plot☆28Updated 2 years ago
- An R for fast and flexible DNA methylation analysis☆31Updated last week
- ☆16Updated 3 weeks ago
- DriverPower☆26Updated 5 months ago
- Interactive R package to quantify, analyse and visualise alternative splicing☆37Updated last week
- Genomic plot in trellis layout☆40Updated last year
- AnaLysis routines for ePigenomicS data - 🏫 Bioconductor project☆16Updated 2 years ago
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆42Updated 3 years ago
- ☆33Updated 3 years ago
- Sashimi plots for RNA-seq data using detected transcripts☆28Updated 3 months ago
- an R/Shiny application for interactive creation of non-circular plots of whole genomes☆45Updated 2 months ago
- a Shiny/R application to view and annotate copy number variations☆28Updated 2 years ago
- Tutorial to reproduce the analysis of Peixoto et al. (2015)☆9Updated 9 years ago
- a set of NGS pipelines☆24Updated 2 weeks ago
- Isoform-level functional RNA-Seq analysis 🧬☆25Updated last month
- Differential Count Data Analysis Toolbox☆61Updated last year
- COMPSRA: a COMprehensive Platform for Small RNA-Seq data Analysis☆16Updated 4 years ago
- HOT regions paper☆11Updated 6 years ago
- Tool for RNA-Seq analysis.☆39Updated 3 years ago
- DRAGEN Tumor/Normal workflow post-processing☆22Updated last year
- Accurate estimation and robust modelling of translation dynamics at codon resolution☆20Updated 8 years ago
- Snakemake based pipeline for RNA-Seq analysis☆31Updated 6 years ago