Alternatives and similar repositories for RscriptCollection

Users that are interested in RscriptCollection are comparing it to the libraries listed below

• wupengomics / scBS-map
  Single-cell Bisulfite Sequencing Data Mapping
  ☆12Updated 4 years ago
• DavidQuigley / WCDT_WGBS
  West Coast Dream Team Whole Genome Bisulfite Sequencing
  ☆15Updated 5 years ago
• hellbelly / BS-Snper
  ☆38Updated 4 years ago
• egaffo / CirComPara
  A multi-method comparative bioinformatics pipeline to detect and study circRNAs from RNA-seq data
  ☆16Updated 5 years ago
• aslihankarabacak / FootprintPipeline
  Pipeline to find transcription factor footprints in DNase-seq or ATAC-seq datasets
  ☆12Updated 6 years ago
• xuzhougeng / RNA-seq-downstream-analysis
  Arabidopsis RNA_-seq downstream analysis shiny app
  ☆30Updated 6 years ago
• kundajelab / ataqc
  ☆17Updated 6 years ago
• mskcc / facets-suite
  Utility functions for FACETS
  ☆39Updated last year
• markowetzlab / Drews2022_CIN_Compendium
  Main repository for Drews et al. (Nature, 2022)
  ☆42Updated 2 years ago
• quevedor2 / aneuploidy_score
  R package to calculate the Aneuploidy Score from Chromosome Arm-level SCNAs/Aneuploidies (CAAs) as outlined and expanded by Shukla et al.…
  ☆16Updated 4 years ago
• shbrief / CNVWorkflow_Code
  CNV analysis workflow code for the manuscript
  ☆13Updated 5 years ago
• ait5 / CNApp
  CNApp represents the first web tool to perform a comprehensive and integrative analysis of copy number alterations (CNAs) in a user-frien…
  ☆20Updated 5 years ago
• ay-lab / ATACProc
  ATAC-seq processing pipeline
  ☆34Updated 3 years ago
• bioinformatist / CrossICC
  An Interactive Consensus Clustering framework for Cross-platform data analysis
  ☆14Updated 3 years ago
• Aufiero / circRNAprofiler
  ☆11Updated 4 months ago
• stjude / ChIPseqSpikeInFree
  A Spike-in Free ChIP-Seq Normalization Approach for Detecting Global Changes in Histone Modifications
  ☆33Updated 3 years ago
• twlab / TEProf2Paper
  TEProf2 Pipeline used to find promoters and predict protein sequences from RNA-sequencing data
  ☆27Updated 2 years ago
• smshuai / DriverPower
  DriverPower
  ☆26Updated 8 months ago
• Niinleslie / MesKit
  A tool kit for dissecting cancer evolution from multi-region derived tumor biopsies via somatic mutations
  ☆35Updated 3 years ago
• wanqingshao / TE_expression_in_scRNAseq
  ☆18Updated 4 years ago
• AlexandrovLab / SigProfilerClusters
  Tool for analyzing the inter-mutational distances between SNV-SNV and INDEL-INDEL mutations. Tool separates mutations into clustered and …
  ☆13Updated last month
• jinghuazhao / TWAS-pipeline
  TWAS-pipeline
  ☆23Updated 4 years ago
• maxsonBraunLab / cutTag-pipeline
  Pipeline for Cut&Tag analysis
  ☆24Updated 5 months ago
• hall-lab / gtex
  GTEx analysis scripts
  ☆20Updated 8 years ago
• SGDDNB / translational_regulation
  Detection of differential translated genes using Ribo-seq
  ☆16Updated 4 years ago
• bioinfo-biols / Code_for_circSC
  Analysis pipeline for our circSC manuscript
  ☆14Updated 3 years ago
• plantformatics / Socrates
  ☆21Updated 6 months ago
• ChrisMaherLab / ClonEvol
  ☆13Updated 8 years ago
• PhanstielLab / bedtoolsr
  R package wrapping bedtools
  ☆43Updated 6 months ago
• zhiyhu / NMD-paper
  A pan-cancer genome-wide analysis reveals tumour dependencies by induction of nonsense-mediated decay
  ☆15Updated 4 years ago