SBRG / MASSpyLinks
☆26Updated 3 years ago
Alternatives and similar repositories for MASSpy
Users that are interested in MASSpy are comparing it to the libraries listed below
Sorting:
- StrainDesign is a python package for the computational design of metabolic networks and based on COBRApy☆48Updated last month
- Comprehensive Python client for the Uniprot REST API☆55Updated 4 months ago
- A 3-Dimensional View of Human Metabolism and Disease☆31Updated 7 years ago
- A Python package for mapping sequence aligned data onto protein structures☆37Updated 4 years ago
- A COBRApy extension for genome-scale models of metabolism and expression (ME-models)☆35Updated 7 years ago
- Metabolic Engineering Workbench☆41Updated last year
- Hierarchical orderings for mass spectrometry data. Canonically pronounced "chemis-tree".☆30Updated 2 years ago
- Release of the whole cell E. coli model.☆76Updated last year
- Python Implementation of Codon Adaption Index☆37Updated 3 years ago
- Python package for analyzing and visualizing iModulons☆14Updated 3 weeks ago
- Absolute quantification package based on quantms.io☆16Updated 4 months ago
- Visualise RNA secondary structure in consistent, reproducible and recognisable layouts☆80Updated last week
- D3.js based visualizations of cobrapy metabolic models☆50Updated 5 years ago
- Enzyme models that take into account kinetics, allostery and thermodynamics☆27Updated last year
- Code for the analyses in the human reference interactome paper.☆28Updated 3 years ago
- retrieve protein sequence identifiers and metadata from http://uniprot.org☆68Updated last month
- a framework for predicting global protein-protein interaction networks from dynamic mass spec data☆24Updated last year
- Simple cloning simulator (Golden Gate etc.) for single and combinatorial assemblies☆64Updated 8 months ago
- Natural Product Discovery tools -- a toolkit containing various pipelines for in silico analysis of natural product mass spectrometry da…☆29Updated 3 years ago
- HLA-I ligand predictor☆43Updated 4 months ago
- A platform to do RNA science☆27Updated 4 years ago
- A high-fidelity E. coli RNA-seq compendium☆33Updated 4 years ago
- ☆15Updated 9 years ago
- ☆68Updated last year
- Untargeted metabolomics workflow for large-scale data processing and analysis implemented in Snakemake☆30Updated last year
- VDJ assignment and antibody sequence annotation. Scalable from a single sequence to billions of sequences.☆44Updated 3 weeks ago
- RNA structure probing and post-transcriptional modifications mapping high-throughput data analysis☆44Updated 3 weeks ago
- Toolbox for including enzyme constraints on a genome-scale model.☆79Updated 2 weeks ago
- Shiny app to easily create publishable plots for scientific papers☆39Updated 6 months ago
- Python package and command line tool for epitope prediction☆52Updated last year