StochPy is a versatile stochastic modeling package which is designed for stochastic simulation of molecular control networks
☆44Jun 20, 2025Updated 11 months ago
Alternatives and similar repositories for stochpy
Users that are interested in stochpy are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Sample and predict coarse grain 3D RNA structures☆10Feb 12, 2024Updated 2 years ago
- StochKit is an extensible tool for stochastic simulation tool with stochastic and multiscale algorithms.☆17Jun 9, 2020Updated 6 years ago
- Love your errors☆14Oct 6, 2021Updated 4 years ago
- Gillespie Stochastic Simulation Algorithm☆14Jun 29, 2013Updated 12 years ago
- ☆26Dec 9, 2022Updated 3 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Fast stochastic simulator for chemical reaction networks☆47Mar 16, 2026Updated 2 months ago
- Code for my workshop "Production-ready WebAssembly with Rust" presented at RustLab 2023 in Florence☆16Nov 23, 2023Updated 2 years ago
- Stochastic Gillespie-type simulations using Julia☆67Feb 24, 2026Updated 3 months ago
- PyDDE: Python/C DDE solver☆17May 21, 2014Updated 12 years ago
- Understand the Gillespie algorithm and build it yourself in Python☆24Feb 23, 2018Updated 8 years ago
- factor models for omics data☆43Updated this week
- Networkx implementation of the SIS epidemic model for large and heterogeneous networks☆18Aug 12, 2023Updated 2 years ago
- ☆13May 26, 2026Updated 2 weeks ago
- Simulation of spatial deterministic/stochastic reaction-diffusion-advection problems embedded in Lagrangian reference frame particle base…☆21Aug 1, 2023Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- The lite version of the package pydlm. A lite yet powerful Bayesian dynamic modeling library☆12Jul 5, 2018Updated 7 years ago
- Python framework for Systems Biology modeling☆197May 19, 2026Updated 3 weeks ago
- Provides utilities for collecting Prometheus-compatible metrics from Tokio runtime and tasks.☆37May 18, 2026Updated 3 weeks ago
- Crixus is a preprocessing tool for SPH, in particular Spartacus3D, Sphynx and GPUSPH.☆11Mar 18, 2016Updated 10 years ago
- Adding conjecturing to Sage☆14Mar 17, 2023Updated 3 years ago
- PePPer - Personalized Perturbation Profiler☆11Oct 4, 2018Updated 7 years ago
- Multi-moment cloud microphysics toy model☆20May 12, 2026Updated 3 weeks ago
- A Mesa-based ABM library for epidemiological (SIR) modeling.☆14Apr 2, 2020Updated 6 years ago
- A Julia implementation of the Quadratic Kalman Filter as in Monfort, Renne, & Roussellet (2014, Journal of Econometrics).☆11May 30, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- 💎 Virtual crypto exchange for testing purposes. API is compatible with major crypto exchanges.☆12Feb 14, 2019Updated 7 years ago
- Fast implementation of some Continuous Wavelet Transforms.☆12Feb 13, 2014Updated 12 years ago
- Python implementation of second generation Vold-Kalman Order Filter☆16Sep 1, 2024Updated last year
- Variational Inference for Langevin Equations☆21Sep 8, 2017Updated 8 years ago
- ☆27Sep 26, 2024Updated last year
- Spacemacs style keymap for Zed☆25Sep 10, 2025Updated 9 months ago
- Run NASA's General Mission Analysis Tool (GMAT) from Julia☆10Sep 3, 2020Updated 5 years ago
- The Density Functional Theory for Electrolyte Solutions☆10Sep 13, 2022Updated 3 years ago
- Rank-normalization, folding, and localization: An improved R-hat for assessing convergence of MCMC☆32Nov 10, 2021Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Rejection-minimal, non-reversible, and continuous-time samplers☆12Nov 14, 2025Updated 6 months ago
- A type safe cookie management crate for the Actix Web framework.☆12Apr 9, 2025Updated last year
- Experimental package that eventually became PyMC3 (https://github.com/pymc-devs/pymc3)☆15Jan 22, 2017Updated 9 years ago
- Draw genetic elements with HTML & CSS☆17May 6, 2026Updated last month
- Einstein summation for Rust☆40Apr 8, 2021Updated 5 years ago
- Rust macros for bug wrangling.☆13Sep 3, 2023Updated 2 years ago
- PyQt4 version of cadnano with Maya integration☆15Jun 21, 2018Updated 7 years ago