Standalone Python package containing libSBML with support for SBML Level 3 Core and accepted SBML Level 3 packages.
☆23Mar 9, 2026Updated 2 months ago
Alternatives and similar repositories for python-libsbml
Users that are interested in python-libsbml are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Python package for building SBML models without needing to use libSBML.☆11Aug 18, 2021Updated 4 years ago
- MOCCASIN translates basic ODE-based MATLAB models of biological processes into SBML format.☆13Aug 21, 2024Updated last year
- ☆21Apr 4, 2026Updated 2 months ago
- LibSBML is a native library for reading, writing and manipulating files and data streams containing the Systems Biology Markup Language (…☆56May 27, 2026Updated last week
- Python utilities for SBML☆41Apr 23, 2026Updated last month
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- The SBML Test Suite is a conformance testing system. It allows developers and users to test the degree and correctness of the SBML suppor…☆27Dec 3, 2025Updated 6 months ago
- The official PySCeS project source code repository.☆40Mar 20, 2026Updated 2 months ago
- PEtab - an SBML and TSV based data format for parameter estimation problems in systems biology☆63Mar 27, 2026Updated 2 months ago
- A simplified python interface to COPASI.☆28Mar 19, 2026Updated 2 months ago
- Repository for libCellML development.☆18Updated this week
- A pure Python implementation of the SBOL standard.☆22Feb 13, 2025Updated last year
- Web based Registry platform for managing synthetic biological parts☆44May 16, 2024Updated 2 years ago
- The Systems Biology Ontology (SBO) is a set of controlled, relational vocabularies of terms commonly used in Systems Biology, and in part…☆12May 16, 2023Updated 3 years ago
- Jupyter widget for the dynamic and static visualizations of systems biology models written in PySB, BNGL, and SBML☆28Mar 13, 2023Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Python Environment for Modeling and Simulating Biological Systems☆142Apr 10, 2026Updated last month
- ☆16Updated this week
- Use ontology terms in your Python application☆21Jun 6, 2025Updated last year
- PyBioPAX: A python implementation of the BioPAX object model☆27May 10, 2024Updated 2 years ago
- Tool suite for kappa models. Documentation and binaries can be found in the release section. Try it online at☆127May 22, 2026Updated 2 weeks ago
- A Python toolbox for COPASI☆13Jun 5, 2024Updated 2 years ago
- SBOL Designer Project☆31Jun 4, 2021Updated 5 years ago
- CANAlization: Control & Redundancy in Boolean Networks☆26May 4, 2026Updated last month
- Homebrew formulae for numerical methods☆11Dec 27, 2021Updated 4 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- a DNA assembly library☆23Aug 13, 2025Updated 9 months ago
- Fostering open source collaboration with technical writers.☆10Aug 17, 2019Updated 6 years ago
- A Python Framework for Modeling and Analysis of Signaling Systems☆29May 25, 2026Updated 2 weeks ago
- The CoLoMoTo Interactive Notebook: Accessible and Reproducible Computational Analyses for Qualitative Biological Networks☆27Updated this week
- An application for parameterization of biological models available in SBML and BNGL formats. Features include parallelization, metaheuris…☆24Updated this week
- Ontology of algorithms for analyzing biological models, their parameters, and their outputs☆12Mar 31, 2026Updated 2 months ago
- pytest-plus adds new features to pytest☆12Oct 27, 2025Updated 7 months ago
- A list of (detailed, non-stochastic) action potential models, with links to papers, source code, CellML and Myokit implementations☆12May 11, 2026Updated 3 weeks ago
- BRENDA parser in python☆23May 16, 2022Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- SymPy based framework for optimized code generation for BSSN formulation of Einstein equation for heterogeneous platforms.☆11Updated this week
- Core library and basic plug-ins for the Amyris Genotype Specification Language (GSL) compiler.☆24Apr 5, 2023Updated 3 years ago
- ☆17May 5, 2026Updated last month
- JSBML is a community-driven project to create a free, open-source, pure Java™ library for reading, writing, and manipulating SBML files (…☆42May 30, 2026Updated last week
- Converts a FigJam flowchart to json☆12Aug 4, 2024Updated last year
- Registry of containerized biosimulation tools that support a standard command-line interface☆15May 28, 2026Updated last week
- COMBINE-compliant implementation of the Mycoplasma genitalium whole-cell model☆10Feb 29, 2016Updated 10 years ago