CovertLab / WholeCellEcoliReleaseLinks
Release of the whole cell E. coli model.
☆73Updated last year
Alternatives and similar repositories for WholeCellEcoliRelease
Users that are interested in WholeCellEcoliRelease are comparing it to the libraries listed below
Sorting:
- A Python framework for structural systems biology☆110Updated 5 years ago
- The BiGG Models website server☆85Updated 6 years ago
- A machine learning tool to improve the effectiveness of strain engineering in synthetic biology☆59Updated last week
- Simple cloning simulator (Golden Gate etc.) for single and combinatorial assemblies☆63Updated 7 months ago
- StrainDesign is a python package for the computational design of metabolic networks and based on COBRApy☆46Updated last month
- Visualise RNA secondary structure in consistent, reproducible and recognisable layouts☆77Updated 2 weeks ago
- cameo - computer aided metabolic engineering & optimization☆122Updated 3 years ago
- The generic genome-scale metabolic model of Homo sapiens☆123Updated this week
- BRENDA parser in python☆22Updated 3 years ago
- D3.js based visualizations of cobrapy metabolic models☆49Updated 5 years ago
- Protein structure comparison tools such as SSAP and SNAP☆66Updated 2 years ago
- The consensus GEM for Saccharomyces cerevisiae☆114Updated 2 weeks ago
- Create force-directed graphs of RNA secondary structures.☆110Updated 5 years ago
- Toolbox for including enzyme constraints on a genome-scale model.☆79Updated 3 weeks ago
- Metabolic Engineering Workbench☆41Updated last year
- nucleic acid folding☆108Updated 4 months ago
- A COBRApy extension for genome-scale models of metabolism and expression (ME-models)☆35Updated 6 years ago
- Generate biomass objective function stoichiometric coefficients for genome-scale models from experimental data☆27Updated 2 years ago
- ☆26Updated 3 years ago
- Models, design algorithms, and other software related to Salis lab publications☆35Updated last year
- WebLogo 3: Sequence Logos redrawn☆152Updated 7 months ago
- Native python implementation of SBOL 3.0 specification☆42Updated 8 months ago
- General low-level API☆50Updated 3 years ago
- 🔧rna-tools: a toolbox to analyze sequences, structures and simulations of RNA (and more) used by RNA CASP, RNA PUZZLES, and me ;-) docs …☆179Updated this week
- retrieve protein sequence identifiers and metadata from http://uniprot.org☆68Updated 4 years ago
- A high-fidelity E. coli RNA-seq compendium☆33Updated 4 years ago
- METIS: A versatile active learning workflow for optimization of genetic and metabolic networks☆30Updated 3 years ago
- Comprehensive Python client for the Uniprot REST API☆53Updated 2 months ago
- PSIPRED Protein Secondary Structure Predictor☆58Updated 5 months ago
- Enzyme models that take into account kinetics, allostery and thermodynamics☆27Updated last year