MCell Monte Carlo Simulator of Cellular Microphysiology
☆37Mar 24, 2026Updated last month
Alternatives and similar repositories for mcell
Users that are interested in mcell are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Create, Simulate, Visualize, and Analyze Realistic 3D Cell Models☆68Apr 15, 2026Updated last month
- A general-purpose, stochastic, biochemical reaction simulator for large reaction networks☆19May 24, 2024Updated last year
- 3D computational model for lipid membranes☆28Feb 17, 2025Updated last year
- Open-source simulator for Surface Plasmon Resonance (SPR) applications implemented in C++ language.☆13Sep 3, 2019Updated 6 years ago
- Dynamic Flux Balance analysis in Python☆12Jan 22, 2016Updated 10 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- An Improved Algorithm to Measure the Semantic Similarity of Gene Ontology Terms☆19Mar 23, 2020Updated 6 years ago
- Simple GUI to batch create DVHs from multiple dicom-RT dose files and a single Dicom-RT contour file☆12Aug 5, 2021Updated 4 years ago
- An Online Tool for the Real-Time Kinetic Analysis of Binding Events☆14Jul 13, 2025Updated 10 months ago
- Notebooks for VoidSeg☆17Feb 10, 2020Updated 6 years ago
- ☆21Apr 28, 2026Updated 3 weeks ago
- Geometry-preserving Adaptive Mesher☆35Sep 3, 2024Updated last year
- ☆11Aug 3, 2023Updated 2 years ago
- Python module to read/write SerialEM navigator files.☆12Jan 17, 2023Updated 3 years ago
- The IUPAC WorldFAIR Cookbook for FAIR chemical data☆29Jan 23, 2026Updated 4 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A Matlab script for deconvolving the CTF in single micrographs/tomograms with a Wiener-like filter☆12Jun 26, 2019Updated 6 years ago
- Batched Energy-Entropy acquisition for Bayesian Optimization (NeurIPS 2024)☆11Jan 6, 2025Updated last year
- AICS ML Segmentation (One-Way) Mirror☆28May 2, 2021Updated 5 years ago
- ☆13May 22, 2025Updated last year
- ☆14Oct 17, 2025Updated 7 months ago
- ☆18Updated this week
- Julia package for the spin wave theory of magnetically ordered quantum spin systems.☆10Mar 25, 2026Updated last month
- Official implementation of paper "Self-Supervised Noise Modeling and Sparsity Guided Cryo-ET Image Denoising" published on Ultramicroscop…☆16Sep 10, 2024Updated last year
- Integrated Cell project implemented in pytorch☆44Oct 15, 2025Updated 7 months ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Core Interface and Engine for Vivarium 1.0☆36Dec 3, 2024Updated last year
- segmentation of spherical vesicles in cryo-electron tomography☆12Oct 25, 2024Updated last year
- Singular Genomics Demultiplexing Tool☆16Mar 5, 2024Updated 2 years ago
- spikebench is an open spike train time-series classification benchmark☆13Oct 3, 2022Updated 3 years ago
- Analysis of ensembles of metabolic network reconstructions☆22Feb 9, 2026Updated 3 months ago
- R package for WebGestalt☆38Dec 5, 2025Updated 5 months ago
- A distributed rendering architecture for ray tracing huge scenes on commodity hardware.☆15Feb 18, 2013Updated 13 years ago
- Code to run the ASEBO algorithm from the paper: From Complexity to Simplicity: Adaptive ES-Active Subspaces for Blackbox Optimization... …☆16Oct 14, 2020Updated 5 years ago
- A Minimum Viable Data Format for using R as a front-end for the Blender 3D Rendering Engine☆17May 3, 2021Updated 5 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Molecular visualization for MDAnalysis with MolecularNodes in Blender☆21Mar 30, 2025Updated last year
- Read MRC format image files into napari using the mrcfile package from CCP-EM☆19May 17, 2024Updated 2 years ago
- ☆16Jan 2, 2024Updated 2 years ago
- Badge is an extension for Quarto to provide a shortcode to display software version or anything as a badge.☆17Apr 15, 2026Updated last month
- Create Interactive Image Comparators from R with the 'image-compare-viewer' Javascript Library☆15Mar 28, 2022Updated 4 years ago
- DE-STRESS is a model evaluation pipeline that aims to make protein design more reliable and accessible.☆31Mar 4, 2025Updated last year
- Variant impact phenotyping using Perturb-seq☆10Apr 22, 2024Updated 2 years ago