cellmodeller / CellModeller
GPU-accelerated multicellular modelling framework
☆61Updated last year
Alternatives and similar repositories for CellModeller:
Users that are interested in CellModeller are comparing it to the libraries listed below
- Individual-based Dynamics of Microbial Communities Simulator☆18Updated 2 years ago
- CompuCell3D public source code repository☆66Updated this week
- PhysiCell: Scientist end users should use latest release! Developers please fork the development branch and submit PRs to the dev branch.…☆157Updated 2 months ago
- CPM implementation in pure JavaScript☆32Updated 2 months ago
- Simulation platform of animal embryogenesis☆20Updated 2 years ago
- framed: a metabolic modeling package for python☆26Updated 5 years ago
- Coral, a library and framework for specifying synthetic biology design processes.☆33Updated 2 years ago
- COPASI is a software application for simulation and analysis of biochemical networks and their dynamics.☆105Updated 3 weeks ago
- A COBRApy extension for genome-scale models of metabolism and expression (ME-models)☆36Updated 6 years ago
- Whole-cell modeling tutorials☆16Updated 4 years ago
- Chaste - Cancer Heart And Soft Tissue Environment - main public repository.☆131Updated last week
- Gillespie Stochastic Simulation Algorithm☆14Updated 11 years ago
- Spheroid models of morphogenesis for the GPU.☆41Updated last year
- Python Environment for Modeling and Simulating Biological Systems☆114Updated 3 weeks ago
- PhysiBoSS 2.0: a sustainable integration of stochastic Boolean and agent-based modelling frameworks☆24Updated this week
- Release of the whole cell E. coli model.☆65Updated 4 months ago
- Python framework for Systems Biology modeling☆181Updated last month
- ☆23Updated 2 years ago
- Official release of the NUFEB software☆18Updated 2 years ago
- Manual, source-code and binaries for the NanoJ-Fluidics project☆50Updated 2 years ago
- Virtual Cell Framework☆79Updated this week
- cameo - computer aided metabolic engineering & optimization☆115Updated 2 years ago
- Interactive, particle-based physics, chemistry and biology modeling and simulation environment☆22Updated 2 months ago
- Models that demonstrate the syntax and functionality of BioNetGen language and simulation tools.☆15Updated last year
- libRoadRunner: A high-performance SBML simulator☆47Updated this week
- Encoding Dynamic Flux Balance Analysis in SBML☆11Updated 4 years ago
- 2022 PhysiCell Hackathon and Workshop☆12Updated 2 years ago
- Computation of Microbial Ecosystems in Time and Space☆24Updated this week
- An R package for the analysis and interpretation of cell migration tracks.☆13Updated 7 months ago
- Visualization of fluorescent protein properties with d3.js. Obsolete.☆12Updated last year