cellmodeller / CellModellerLinks
GPU-accelerated multicellular modelling framework
☆64Updated 4 months ago
Alternatives and similar repositories for CellModeller
Users that are interested in CellModeller are comparing it to the libraries listed below
Sorting:
- PhysiCell: Scientist end users should use latest release! Developers please fork the development branch and submit PRs to the dev branch.…☆170Updated 6 months ago
- COPASI is a software application for simulation and analysis of biochemical networks and their dynamics.☆113Updated last week
- Rule-based modeling framework☆64Updated 2 months ago
- Python Environment for Modeling and Simulating Biological Systems☆122Updated last month
- Python framework for Systems Biology modeling☆184Updated last month
- CompuCell3D public source code repository☆72Updated last week
- Coral, a library and framework for specifying synthetic biology design processes.☆33Updated 2 years ago
- Simulation platform of animal embryogenesis☆20Updated 3 years ago
- framed: a metabolic modeling package for python☆26Updated 5 years ago
- PhysiBoSS 2.0: a sustainable integration of stochastic Boolean and agent-based modelling frameworks☆26Updated this week
- Whole-cell modeling tutorials☆16Updated 5 years ago
- ☆25Updated 2 years ago
- Chaste - Cancer Heart And Soft Tissue Environment - main public repository.☆139Updated this week
- libRoadRunner: A high-performance SBML simulator☆50Updated last month
- Virtual Cell Framework☆92Updated this week
- Encoding Dynamic Flux Balance Analysis in SBML☆12Updated 4 years ago
- Release of the whole cell E. coli model.☆68Updated 8 months ago
- Interactive, particle-based physics, chemistry and biology modeling and simulation environment☆23Updated last month
- Simple cloning simulator (Golden Gate etc.) for single and combinatorial assemblies☆62Updated 3 months ago
- Modeling toolkit for biochemical simulation☆76Updated 7 months ago
- An R package for the analysis and interpretation of cell migration tracks.☆13Updated last year
- BioSCRAPE (Bio-circuit Stochastic Single-cell Reaction Analysis and Parameter Estimation)☆29Updated 4 months ago
- SWIG-Python wrappers implementing SBOL 2.2☆25Updated 3 years ago
- A COBRApy extension for genome-scale models of metabolism and expression (ME-models)☆35Updated 6 years ago
- An integrated visual environment for metabolic modeling with common methods such as FBA, FVA and Elementary Flux Modes, and advanced feat…☆57Updated last month
- Individual-based Dynamics of Microbial Communities Simulator☆18Updated 3 years ago
- QUEEN: a framework to generate quinable and efficiently editable nucleotide sequence resources☆44Updated 3 weeks ago
- The BiGG Models website server☆83Updated 5 years ago
- HAL (Hybrid Automata Library) is the one-stop shop for all of your hybrid modeling needs☆37Updated last year
- Computation of Microbial Ecosystems in Time and Space☆24Updated 2 weeks ago