RECOVERcoalition / RecoverLinks
Exploring the space of drug combinations to discover synergistic drugs using Active Learning
☆24Updated 11 months ago
Alternatives and similar repositories for Recover
Users that are interested in Recover are comparing it to the libraries listed below
Sorting:
- Combinatorial prediction of therapeutic perturbations using causally-inspired neural networks☆28Updated 2 months ago
- Implementation of Neural Distance Embeddings for Biological Sequences (NeuroSEED) in PyTorch (NeurIPS 2021)☆72Updated last year
- GeneDisco is a benchmark suite for evaluating active learning algorithms for experimental design in drug discovery.☆38Updated 2 years ago
- Drug Discovery under Covariate Shift with Domain-Informed Prior Distributions over Functions☆24Updated 2 years ago
- Epistatic Net is an algorithm which allows for spectral regularization of deep neural networks to predict biological fitness functions (e…☆18Updated 4 years ago
- Deep Graph Mapper: Seeing Graphs through the Neural Lens☆58Updated 2 years ago
- Readings for "A Unified View of Relational Deep Learning for Drug Pair Scoring." (IJCAI 2022)☆96Updated 3 years ago
- A Modular Architecture for Deep Learning Systems☆43Updated 2 months ago
- Sequential Optimal Experimental Design of Perturbation Screens Guided by Multimodal Priors☆40Updated last year
- The starter repository for submissions to the GeneDisco challenge for optimized experimental design in genetic perturbation experiments.☆24Updated 3 years ago
- Homology reduced UniProt, train-/valid-/testsets for language modeling☆17Updated 3 years ago
- Differentiable Euler Characteristic Transform☆17Updated last year
- Code corresponding to the paper Diffusion Earth Mover's Distance and Distribution Embeddings☆37Updated 8 months ago
- code for Gogleva et al manuscript☆45Updated 2 years ago
- LC-PLM: long-context protein language model based on BiMamba-S architecture☆21Updated 7 months ago
- Code for the paper LaM-SLidE - Latent Space Modeling of Spatial Dynamical Systems via Linked Entities☆25Updated 2 months ago
- Geometric Deep Learning @ University of Cambridge☆25Updated 5 months ago
- A repository for reproducing experiments from the TxPert paper☆14Updated 2 months ago
- ☆45Updated last month
- ☆29Updated 2 years ago
- Open source code for AlphaFold to extract protein embeddings☆27Updated 4 years ago
- The code for "Learning Molecular Representation in a Cell"☆37Updated 5 months ago
- Paper list for equivariant neural network☆10Updated 3 years ago
- ☆81Updated last year
- This repository contains code for reproducing results in our paper Interpreting Potts and Transformer Protein Models Through the Lens of …☆58Updated 2 years ago
- ☆19Updated 2 years ago
- Official implementation of Joint Multidimensional Scaling☆22Updated last year
- Contrastive neighbor embeddings☆54Updated 5 months ago
- Code for "Biological Sequence Design with GFlowNets", 2022☆74Updated 2 years ago
- Graph transport network (GTN), as proposed in "Scalable Optimal Transport in High Dimensions for Graph Distances, Embedding Alignment, an…☆15Updated 2 years ago