An open-source platform for developing protein models beyond AlphaFold.
☆424Jun 26, 2024Updated 2 years ago
Alternatives and similar repositories for Uni-Fold
Users that are interested in Uni-Fold are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- OmegaFold Release Code☆627Dec 12, 2022Updated 3 years ago
- Optimizing AlphaFold Training and Inference on GPU Clusters☆616Jul 16, 2024Updated 2 years ago
- A collection of *fold* tools☆303Aug 8, 2025Updated last year
- Trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2☆3,433Dec 16, 2025Updated 9 months ago
- ☆214Apr 21, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Making Protein Design accessible to all via Google Colab!☆941Aug 28, 2026Updated 3 weeks ago
- AlphaLink2: Integrating crosslinking MS data into Uni-Fold-Multimer☆69Aug 26, 2025Updated last year
- Fast, accurate antibody structure prediction from deep learning on massive set of natural antibodies☆433Sep 9, 2026Updated 2 weeks ago
- Python code for fine-tuning AlphaFold to perform protein-peptide binding predictions☆176Dec 24, 2023Updated 2 years ago
- RoseTTAFold2 protein/nucleic acid complex prediction☆380Jun 3, 2024Updated 2 years ago
- Diffusion models of protein structure; trigonometry and attention are all you need!☆568Sep 9, 2026Updated 2 weeks ago
- Making Protein folding accessible to all!☆2,934Updated this week
- Predict multiple protein conformations using sequence clustering and AlphaFold2.☆192Oct 7, 2025Updated 11 months ago
- EigenFold: Generative Protein Structure Prediction with Diffusion Models☆179Apr 6, 2023Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆219Sep 24, 2024Updated 2 years ago
- Foldseek enables fast and sensitive comparisons of large structure sets.☆1,298Sep 9, 2026Updated 2 weeks ago
- DockQ is a single continuous quality measure for Protein, Nucleic Acids and Small Molecule Docking Models☆429Feb 26, 2026Updated 6 months ago
- Trainable AlphaFold implementation in JAX☆158Aug 6, 2022Updated 4 years ago
- Code for the ProteinMPNN paper☆1,857Aug 14, 2024Updated 2 years ago
- An all-atom protein structure dataset for machine learning.☆366Mar 16, 2024Updated 2 years ago
- Protein hallucination and inpainting with RoseTTAFold☆285Mar 30, 2023Updated 3 years ago
- Predicting direct protein-protein interactions with AlphaFold deep learning neural network models.☆176Sep 8, 2024Updated 2 years ago
- Joint sequence and structure generation with RoseTTAFold sequence space diffusion☆332Oct 28, 2024Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Evolutionary Scale Modeling (esm): Pretrained language models for proteins☆4,171Feb 7, 2024Updated 2 years ago
- Compressing protein structures effectively with torsion angles☆197Sep 7, 2026Updated 2 weeks ago
- AlphaLink: Integrating crosslinking MS data into OpenFold☆77Dec 14, 2023Updated 2 years ago
- Code for ColabDock paper☆158May 1, 2025Updated last year
- Implementation for SE(3) diffusion model with application to protein backbone generation☆424Jul 3, 2023Updated 3 years ago
- De Novo Protein Design by Equivariantly Diffusing Oriented Residue Clouds☆190Apr 21, 2024Updated 2 years ago
- The official implementation of the ICLR'23 paper PiFold: Toward effective and efficient protein inverse folding.☆183Jun 17, 2023Updated 3 years ago
- Diffusion-based all-atom protein generative model.☆239Aug 27, 2025Updated last year
- Implementation of the DDPM + IPA (invariant point attention) for protein generation, as outlined in the paper "Protein Structure and Sequ…☆89Jul 25, 2022Updated 4 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆93Sep 25, 2024Updated last year
- EquiDock: geometric deep learning for fast rigid 3D protein-protein docking☆260Sep 22, 2023Updated 3 years ago
- Jupyter Notebooks for learning the PyRosetta platform for biomolecular structure prediction and design☆709Updated this week
- ✌🏻 Antigen-Specific Antibody Design and Optimization with Diffusion-Based Generative Models for Protein Structures (NeurIPS 2022)☆370Jun 29, 2023Updated 3 years ago
- Structure-conditioned masked language modeling for protein sequence design☆74Jan 31, 2024Updated 2 years ago
- ☆53Sep 25, 2024Updated last year
- ☆324Sep 16, 2026Updated last week