Alternatives and similar repositories for Uni-Fold

Users that are interested in Uni-Fold are comparing it to the libraries listed below

• microsoft / foldingdiff
  Diffusion models of protein structure; trigonometry and attention are all you need!
  ☆556Updated last year
• uw-ipd / RoseTTAFold2NA
  RoseTTAFold2 protein/nucleic acid complex prediction
  ☆366Updated last year
• Graylab / IgFold
  Fast, accurate antibody structure prediction from deep learning on massive set of natural antibodies
  ☆381Updated 2 years ago
• biolists / folding_tools
  A collection of *fold* tools
  ☆300Updated 2 months ago
• Zuricho / ParallelFold
  Modified version of Alphafold to divide CPU part (MSA and template searching) and GPU part. This can accelerate Alphafold when predicting…
  ☆170Updated last year
• RosettaCommons / RFDesign
  Protein hallucination and inpainting with RoseTTAFold
  ☆270Updated 2 years ago
• luost26 / diffab
  ✌🏻 Antigen-Specific Antibody Design and Optimization with Diffusion-Based Generative Models for Protein Structures (NeurIPS 2022)
  ☆347Updated 2 years ago
• bjing2016 / alphaflow
  AlphaFold Meets Flow Matching for Generating Protein Ensembles
  ☆487Updated this week
• HeliXonProtein / OmegaFold
  OmegaFold Release Code
  ☆601Updated 2 years ago
• dptech-corp / Uni-Fold-jax
  Trainable AlphaFold implementation in JAX
  ☆159Updated 3 years ago
• adaptyvbio / ProteinFlow
  Versatile computational pipeline for processing protein structure data for deep learning applications.
  ☆266Updated last year
• OATML-Markslab / ProteinGym
  Official repository for the ProteinGym benchmarks
  ☆358Updated 3 months ago
• RosettaCommons / protein_generator
  Joint sequence and structure generation with RoseTTAFold sequence space diffusion
  ☆322Updated 11 months ago
• zrqiao / NeuralPLexer
  NeuralPLexer: State-specific protein-ligand complex structure prediction with a multi-scale deep generative model
  ☆308Updated 2 weeks ago
• jonathanking / sidechainnet
  An all-atom protein structure dataset for machine learning.
  ☆355Updated last year
• sokrypton / ColabDesign
  Making Protein Design accessible to all via Google Colab!
  ☆829Updated this week
• HannesStark / EquiBind
  EquiBind: geometric deep learning for fast predictions of the 3D structure in which a small molecule binds to a protein
  ☆522Updated 8 months ago
• baker-laboratory / rf_diffusion_all_atom
  Public RFDiffusionAA repo
  ☆443Updated last year
• lightdock / lightdock
  Protein-protein, protein-peptide and protein-DNA docking framework based on the GSO algorithm
  ☆360Updated last month
• RosettaCommons / rosetta
  The Rosetta Bio-macromolecule modeling package.
  ☆331Updated last week
• microsoft / protein-sequence-models
  ☆253Updated last year
• wallnerlab / DockQ
  DockQ is a single continuous quality measure for Protein, Nucleic Acids and Small Molecule Docking Models
  ☆331Updated 2 months ago
• uw-ipd / RoseTTAFold2
  ☆199Updated 6 months ago
• RosettaCommons / PyRosetta.notebooks
  Jupyter Notebooks for learning the PyRosetta platform for biomolecular structure prediction and design
  ☆623Updated last year
• dptech-corp / Uni-Dock
  Uni-Dock: a GPU-accelerated molecular docking program
  ☆253Updated last month
• octavian-ganea / equidock_public
  EquiDock: geometric deep learning for fast rigid 3D protein-protein docking
  ☆250Updated 2 years ago
• baker-laboratory / RoseTTAFold-All-Atom
  ☆758Updated 4 months ago
• microsoft / AI2BMD
  AI-powered ab initio biomolecular dynamics simulation
  ☆546Updated 8 months ago
• lucidrains / chroma-pytorch
  Implementation of Chroma, generative models of protein using DDPM and GNNs, in Pytorch
  ☆158Updated 2 years ago
• nrbennet / dl_binder_design
  ☆360Updated last year