An open-source platform for developing protein models beyond AlphaFold.
☆414Jun 26, 2024Updated last year
Alternatives and similar repositories for Uni-Fold
Users that are interested in Uni-Fold are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- OmegaFold Release Code☆615Dec 12, 2022Updated 3 years ago
- Optimizing AlphaFold Training and Inference on GPU Clusters☆613Jul 16, 2024Updated last year
- A collection of *fold* tools☆302Aug 8, 2025Updated 7 months ago
- Trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2☆3,314Dec 16, 2025Updated 3 months ago
- ☆211Apr 21, 2025Updated 11 months ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Making Protein Design accessible to all via Google Colab!☆895Mar 10, 2026Updated 2 weeks ago
- AlphaLink2: Integrating crosslinking MS data into Uni-Fold-Multimer☆63Aug 26, 2025Updated 7 months ago
- Fast, accurate antibody structure prediction from deep learning on massive set of natural antibodies☆409Sep 3, 2023Updated 2 years ago
- Python code for fine-tuning AlphaFold to perform protein-peptide binding predictions☆172Dec 24, 2023Updated 2 years ago
- RoseTTAFold2 protein/nucleic acid complex prediction☆379Jun 3, 2024Updated last year
- Diffusion models of protein structure; trigonometry and attention are all you need!☆565Dec 12, 2023Updated 2 years ago
- Making Protein folding accessible to all!☆2,685Mar 17, 2026Updated last week
- Predict multiple protein conformations using sequence clustering and AlphaFold2.☆177Oct 7, 2025Updated 5 months ago
- EigenFold: Generative Protein Structure Prediction with Diffusion Models☆180Apr 6, 2023Updated 2 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- ☆214Sep 24, 2024Updated last year
- Foldseek enables fast and sensitive comparisons of large structure sets.☆1,196Mar 10, 2026Updated 2 weeks ago
- DockQ is a single continuous quality measure for Protein, Nucleic Acids and Small Molecule Docking Models☆376Feb 26, 2026Updated last month
- Trainable AlphaFold implementation in JAX☆158Aug 6, 2022Updated 3 years ago
- Code for the ProteinMPNN paper☆1,665Aug 14, 2024Updated last year
- An all-atom protein structure dataset for machine learning.☆360Mar 16, 2024Updated 2 years ago
- Predicting direct protein-protein interactions with AlphaFold deep learning neural network models.☆170Sep 8, 2024Updated last year
- AlphaLink: Integrating crosslinking MS data into OpenFold☆74Dec 14, 2023Updated 2 years ago
- Evolutionary Scale Modeling (esm): Pretrained language models for proteins☆4,009Feb 7, 2024Updated 2 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Joint sequence and structure generation with RoseTTAFold sequence space diffusion☆330Oct 28, 2024Updated last year
- Code for ColabDock paper☆152May 1, 2025Updated 10 months ago
- De Novo Protein Design by Equivariantly Diffusing Oriented Residue Clouds☆186Apr 21, 2024Updated last year
- Compressing protein structures effectively with torsion angles☆191Feb 10, 2026Updated last month
- The official implementation of the ICLR'23 paper PiFold: Toward effective and efficient protein inverse folding.☆183Jun 17, 2023Updated 2 years ago
- Implementation for SE(3) diffusion model with application to protein backbone generation☆415Jul 3, 2023Updated 2 years ago
- Protein hallucination and inpainting with RoseTTAFold☆280Mar 30, 2023Updated 2 years ago
- Diffusion-based all-atom protein generative model.☆233Aug 27, 2025Updated 6 months ago
- an efficient distributed PyTorch framework☆160Jul 19, 2025Updated 8 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- Implementation of the DDPM + IPA (invariant point attention) for protein generation, as outlined in the paper "Protein Structure and Sequ…☆89Jul 25, 2022Updated 3 years ago
- ☆92Sep 25, 2024Updated last year
- Jupyter Notebooks for learning the PyRosetta platform for biomolecular structure prediction and design☆677Feb 27, 2026Updated 3 weeks ago
- EquiDock: geometric deep learning for fast rigid 3D protein-protein docking☆256Sep 22, 2023Updated 2 years ago
- ✌🏻 Antigen-Specific Antibody Design and Optimization with Diffusion-Based Generative Models for Protein Structures (NeurIPS 2022)☆356Jun 29, 2023Updated 2 years ago
- Structure-conditioned masked language modeling for protein sequence design☆72Jan 31, 2024Updated 2 years ago
- Versatile computational pipeline for processing protein structure data for deep learning applications.☆274Feb 14, 2024Updated 2 years ago