Minimal but speedy quality control for nanopore reads in Rust
☆139Sep 16, 2024Updated last year
Alternatives and similar repositories for nanoq
Users that are interested in nanoq are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Assemble bacterial isolate genomes from Nanopore reads☆136Jan 22, 2025Updated last year
- a short-read polishing tool for long-read assemblies☆222Jul 28, 2026Updated last week
- quality filtering tool for long reads☆411Sep 17, 2025Updated 10 months ago
- Standalone Python re-implementation of the POLCA polisher from MaSuRCA☆47Aug 20, 2025Updated 11 months ago
- High-quality Nanopore-only genome polisher☆71Aug 16, 2024Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Randomly subsample sequencing reads or alignments☆271Updated this week
- Ultra-fast preprocessing and quality control for long-read sequencing data☆234Sep 6, 2025Updated 10 months ago
- A *fast* tool for BAM/CRAM quality evaluation, intended for long reads☆188Updated this week
- A tool for generating consensus long-read assemblies for bacterial genomes☆235Updated this week
- Remove human reads from a sequencing run☆51Jun 29, 2026Updated last month
- A new high-resolution long-read metagenome assembler for even noisy reads☆162Jul 3, 2026Updated last month
- Read alignment statistics for metagenomics☆405Jul 10, 2026Updated 3 weeks ago
- ☆261Updated this week
- Create statistic summary of an Oxford Nanopore read dataset☆137Nov 4, 2022Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Strain-level haplotyping for metagenomes with short or long-reads.☆69Apr 10, 2025Updated last year
- Graph-based assembly phasing☆99Nov 25, 2025Updated 8 months ago
- pycoQC computes metrics and generates Interactive QC plots from the sequencing summary report generated by Oxford Nanopore technologies b…