ProteinDesignLab / protein-design-tutorialsLinks
Tutorials, cheat sheets, and other resources for computational methods for protein design.
☆128Updated 2 years ago
Alternatives and similar repositories for protein-design-tutorials
Users that are interested in protein-design-tutorials are comparing it to the libraries listed below
Sorting:
- Code for ColabDock paper☆150Updated 8 months ago
- Predict multiple protein conformations using sequence clustering and AlphaFold2.☆170Updated 3 months ago
- Predict the binding affinity of protein-protein complexes from structural data☆167Updated 3 months ago
- Python code for fine-tuning AlphaFold to perform protein-peptide binding predictions☆168Updated 2 years ago
- ☆139Updated 3 years ago
- Predict the structure of immune receptor proteins☆167Updated 2 months ago
- ☆146Updated 5 months ago
- GNN trained to predict changes in thermodynamic stability for protein point mutants☆219Updated 5 months ago
- Protein folding in Pymol☆131Updated last month
- ☆120Updated last year
- A compilation of deep learning methods for protein design☆97Updated 3 years ago
- Rifdock Library for Conformational Search☆166Updated last year
- In silico directed evolution of peptide binders with AlphaFold☆257Updated last week
- PyMOL extension to color AlphaFold structures by confidence (pLDDT).☆118Updated last year
- Official repo of the modular BioExcel version of HADDOCK☆216Updated last week
- Scoring function for interprotein interactions in AlphaFold2 and AlphaFold3☆184Updated last week
- A machine-learning package for navigating combinatorial protein fitness landscapes.☆130Updated 4 years ago
- Deep learning models and structure realization scripts for the DeepAb antibody structure prediction method.☆167Updated 3 years ago
- open source code for Tencent tFold☆137Updated 10 months ago
- AlphaFold-initiated replica exchange protein docking☆87Updated 7 months ago
- Convenience Python APIs for antibody numbering using ANARCI☆112Updated 7 months ago
- Making Protein Language Modeling Accessible to All Biologists☆144Updated this week
- Efficient evolution from protein language models☆218Updated 2 years ago
- Protein-ligand structure prediction☆236Updated 5 months ago
- Masif seed paper repository☆169Updated 3 months ago
- ☆180Updated 4 years ago
- BioPhi is an open-source antibody design platform. It features methods for automated antibody humanization (Sapiens), humanness evaluatio…☆221Updated 8 months ago
- Geometric deep learning method to predict protein binding interfaces from a protein structure.☆151Updated 2 years ago
- Improved antibody structure-based design using inverse folding☆151Updated last month
- Target Sequence-Conditioned Generation of Peptide Binders via Masked Language Modeling☆109Updated 2 months ago