ProteinDesignLab / protein-design-tutorialsLinks
Tutorials, cheat sheets, and other resources for computational methods for protein design.
☆124Updated 2 years ago
Alternatives and similar repositories for protein-design-tutorials
Users that are interested in protein-design-tutorials are comparing it to the libraries listed below
Sorting:
- Code for ColabDock paper☆150Updated 7 months ago
- Python code for fine-tuning AlphaFold to perform protein-peptide binding predictions☆167Updated 2 years ago
- Predict the binding affinity of protein-protein complexes from structural data☆165Updated 2 months ago
- Predict the structure of immune receptor proteins☆167Updated last month
- Predict multiple protein conformations using sequence clustering and AlphaFold2.☆168Updated 2 months ago
- ☆135Updated 3 years ago
- Convenience Python APIs for antibody numbering using ANARCI☆111Updated 7 months ago
- ☆118Updated last year
- Protein folding in Pymol☆127Updated last month
- A machine-learning package for navigating combinatorial protein fitness landscapes.☆130Updated 4 years ago
- Rifdock Library for Conformational Search☆165Updated last year
- A compilation of deep learning methods for protein design☆97Updated 3 years ago
- GNN trained to predict changes in thermodynamic stability for protein point mutants☆214Updated 4 months ago
- PyMOL extension to color AlphaFold structures by confidence (pLDDT).☆117Updated last year
- ☆143Updated 5 months ago
- Universal Structure Alignment of Monomeric and Complex Structure of Nucleic Acids and Proteins☆166Updated 8 months ago
- Efficient evolution from protein language models☆217Updated 2 years ago
- In silico directed evolution of peptide binders with AlphaFold☆249Updated last month
- Official repo of the modular BioExcel version of HADDOCK☆214Updated last week
- Scoring function for interprotein interactions in AlphaFold2 and AlphaFold3☆173Updated 8 months ago
- Making Protein Language Modeling Accessible to All Biologists☆140Updated last week
- Masif seed paper repository☆167Updated 3 months ago
- Improved antibody structure-based design using inverse folding☆147Updated 2 weeks ago
- ☆205Updated 8 months ago
- Predicting direct protein-protein interactions with AlphaFold deep learning neural network models.☆166Updated last year
- Geometric deep learning method to predict protein binding interfaces from a protein structure.☆151Updated 2 years ago
- Protein-ligand structure prediction☆235Updated 4 months ago
- BioPhi is an open-source antibody design platform. It features methods for automated antibody humanization (Sapiens), humanness evaluatio…☆216Updated 7 months ago
- Deep learning models and structure realization scripts for the DeepAb antibody structure prediction method.☆167Updated 3 years ago
- trRosetta for protein design☆183Updated 4 years ago