Alternatives and similar repositories for PyRosetta.notebooks

Users that are interested in PyRosetta.notebooks are comparing it to the libraries listed below

• martinpacesa / BindCraft
  User friendly and accurate binder design pipeline
  ☆522Updated last month
• sokrypton / ColabDesign
  Making Protein Design accessible to all via Google Colab!
  ☆725Updated last week
• Graylab / IgFold
  Fast, accurate antibody structure prediction from deep learning on massive set of natural antibodies
  ☆356Updated last year
• YoshitakaMo / localcolabfold
  ColabFold on your local PC
  ☆696Updated 3 weeks ago
• nrbennet / dl_binder_design
  ☆309Updated 9 months ago
• baker-laboratory / rf_diffusion_all_atom
  Public RFDiffusionAA repo
  ☆392Updated 10 months ago
• uw-ipd / RoseTTAFold2NA
  RoseTTAFold2 protein/nucleic acid complex prediction
  ☆358Updated 11 months ago
• pablo-arantes / making-it-rain
  Cloud-based molecular simulations for everyone
  ☆434Updated last month
• RosettaCommons / RFDesign
  Protein hallucination and inpainting with RoseTTAFold
  ☆259Updated 2 years ago
• RosettaCommons / protein_generator
  Joint sequence and structure generation with RoseTTAFold sequence space diffusion
  ☆311Updated 6 months ago
• dauparas / LigandMPNN
  ☆378Updated 3 months ago
• pharmai / plip
  Protein-Ligand Interaction Profiler - Analyze and visualize non-covalent protein-ligand interactions in PDB files according to 📝 Adasme …
  ☆526Updated last month
• baker-laboratory / RoseTTAFold-All-Atom
  ☆712Updated 9 months ago
• LPDI-EPFL / masif
  MaSIF- Molecular surface interaction fingerprints. Geometric deep learning to decipher patterns in molecular surfaces.
  ☆652Updated 10 months ago
• Pymol-Scripts / Pymol-script-repo
  Collected scripts for Pymol
  ☆477Updated 2 weeks ago
• bjornwallner / DockQ
  DockQ is a single continuous quality measure for Protein, Nucleic Acids and Small Molecule Docking Models
  ☆277Updated 3 months ago
• RosettaCommons / rosetta
  The Rosetta Bio-macromolecule modeling package.
  ☆261Updated this week
• kalininalab / alphafold_non_docker
  AlphaFold2 non-docker setup
  ☆357Updated last year
• KosinskiLab / AlphaPulldown
  ☆271Updated this week
• gnina / gnina
  A deep learning framework for molecular docking
  ☆718Updated 2 weeks ago
• pb3lab / ibm3202
  Google Colab Tutorials for IBM3202
  ☆257Updated 6 months ago
• openmm / pdbfixer
  PDBFixer fixes problems in PDB files
  ☆544Updated 2 months ago
• steineggerlab / foldseek
  Foldseek enables fast and sensitive comparisons of large structure sets.
  ☆973Updated this week
• biolists / folding_tools
  A collection of *fold* tools
  ☆293Updated 7 months ago
• AngelRuizMoreno / Jupyter_Dock
  Jupyter Dock is a set of Jupyter Notebooks for performing molecular docking protocols interactively, as well as visualizing, converting f…
  ☆267Updated last year
• ChatMol / ChatMol
  ChatMol
  ☆226Updated 2 months ago
• Discngine / fpocket
  fpocket is a very fast open source protein pocket detection algorithm based on Voronoi tessellation. The platform is suited for the scien…
  ☆350Updated 8 months ago
• zrqiao / NeuralPLexer
  NeuralPLexer: State-specific protein-ligand complex structure prediction with a multi-scale deep generative model
  ☆290Updated last year
• mat10d / EvolvePro
  This is the offical codebase to reproduce and use EVOLVEpro, a model for in silico directed evolution of protein activities using few-sho…
  ☆250Updated last month
• RosettaCommons / RFantibody
  ☆203Updated last month