Alternatives and similar repositories for how_to_create_a_protein

Users that are interested in how_to_create_a_protein are comparing it to the libraries listed below

• adaptyvbio / ProteinFlow
  Versatile computational pipeline for processing protein structure data for deep learning applications.
  ☆269Updated last year
• martinez-zacharya / TRILL
  Sandbox for Deep-Learning based Computational Protein Design
  ☆120Updated 2 weeks ago
• hgbrian / biomodals
  bioinformatics tools running on modal
  ☆113Updated last month
• prescient-design / lobster
  Lbster: Language models for Biological Sequence Transformation and Evolutionary Representation
  ☆140Updated last week
• Zuricho / ProteinDesignLabs
  List of computational protein design research labs
  ☆218Updated 10 months ago
• Bitbol-Lab / ProtMamba-ssm
  ProtMamba: a homology-aware but alignment-free protein state space model
  ☆82Updated 6 months ago
• pengzhangzhi / faplm
  FAPLM: A Drop-in Efficient Pytorch Implementation of Protein Language Models
  ☆160Updated 5 months ago
• brianhie / efficient-evolution
  Efficient evolution from protein language models
  ☆217Updated 2 years ago
• etowahadams / interprot
  [ICML 25] We train and evaluate SAEs to identify interpretable features in pLMs and show their potential for scientific discovery.
  ☆121Updated 2 months ago
• phbradley / alphafold_finetune
  Python code for fine-tuning AlphaFold to perform protein-peptide binding predictions
  ☆167Updated 2 years ago
• oxpig / AntiFold
  Improved antibody structure-based design using inverse folding
  ☆147Updated 3 weeks ago
• colbyford / PyMOLfold
  Plugin for folding sequences directly in PyMOL
  ☆112Updated 4 months ago
• idmjky / EvolvePro
  PLM based active learning model for protein engineering
  ☆84Updated last year
• AbSciBio / unlocking-de-novo-antibody-design
  ☆133Updated last year
• ProteinDesignLab / protein-design-tutorials
  Tutorials, cheat sheets, and other resources for computational methods for protein design.
  ☆127Updated 2 years ago
• microsoft / protein-sequence-models
  ☆253Updated last year
• FreshAirTonight / af2complex
  Predicting direct protein-protein interactions with AlphaFold deep learning neural network models.
  ☆166Updated last year
• Sanofi-Public / CodonBERT
  Repository for mRNA Paper and CodonBERT publication.
  ☆138Updated last year
• kilianmandon / alphafold-decoded
  Hands-on AlphaFold implementation for educational purposes.
  ☆98Updated 8 months ago
• mims-harvard / ATOMICA
  Learning Universal Representations of Intermolecular Interactions with ATOMICA
  ☆192Updated 3 months ago
• swansonk14 / SyntheMol
  Combinatorial antibiotic generation
  ☆193Updated 2 months ago
• SantiagoMille / germinal
  Codebase for Germinal, a broadly enabling generative pipeline for efficient generation of epitope-targeted de novo antibodies.
  ☆178Updated last month
• debbiemarkslab / SeqDesign
  Protein design and variant prediction using autoregressive generative models
  ☆117Updated last year
• NREL / EvoProtGrad
  Directed evolution of proteins in sequence space with gradients
  ☆93Updated 2 months ago
• Adibvafa / CodonTransformer
  CodonTransformer (1M+ Downloads); The tool for codon optimization, optimizing DNA for protein expression
  ☆190Updated 5 months ago
• chaitjo / geometric-rna-design
  gRNAde is a Generative AI framework for inverse design of 3D RNA structure and function
  ☆281Updated 2 weeks ago
• steineggerlab / foldcomp
  Compressing protein structures effectively with torsion angles
  ☆183Updated last week
• debbiemarkslab / EVcouplings
  Evolutionary couplings from protein and RNA sequence alignments
  ☆294Updated 2 months ago
• Multiomics-Analytics-Group / course_protein_language_modeling
  ☆45Updated 4 months ago
• JeffSHF / ColabDock
  Code for ColabDock paper
  ☆150Updated 7 months ago