guyujun / pyrosetta-basic

Related projects ⓘ

Alternatives and complementary repositories for pyrosetta-basic

• bjornwallner / DockQ
  DockQ is a single continuous quality measure for Protein, Nucleic Acids and Small Molecule Docking Models
  ☆224Updated 2 months ago
• rifdock / rifdock
  Rifdock Library for Conformational Search
  ☆143Updated 6 months ago
• Kortemme-Lab / flex_ddG_tutorial
  ☆84Updated 2 years ago
• ProteinDesignLab / protein-design-tutorials
  Tutorials, cheat sheets, and other resources for computational methods for protein design.
  ☆99Updated last year
• ikalvet / heme_binder_diffusion
  ☆94Updated last month
• RosettaCommons / DeepAb
  Deep learning models and structure realization scripts for the DeepAb antibody structure prediction method.
  ☆147Updated last year
• hefeda / design_tools
  A compilation of deep learning methods for protein design
  ☆94Updated 2 years ago
• JeffSHF / ColabDock
  Code for ColabDock paper
  ☆127Updated last month
• oxpig / ImmuneBuilder
  Predict the structure of immune receptor proteins
  ☆120Updated 4 months ago
• prihoda / AbNumber
  Convenience Python APIs for antibody numbering using ANARCI
  ☆84Updated last month
• zhanghaicang / carbonmatrix_public
  ☆96Updated 3 weeks ago
• patrickbryant1 / EvoBind
  In silico directed evolution of peptide binders with AlphaFold
  ☆126Updated last month
• jertubiana / ScanNet
  ☆118Updated last year
• nrbennet / dl_binder_design
  ☆248Updated 3 months ago
• Merck / BioPhi
  BioPhi is an open-source antibody design platform. It features methods for automated antibody humanization (Sapiens), humanness evaluatio…
  ☆152Updated 2 months ago
• fhalab / MLDE
  A machine-learning package for navigating combinatorial protein fitness landscapes.
  ☆122Updated 3 years ago
• Luo-SynBioLab / UniKP
  ☆49Updated 8 months ago
• RosettaCommons / RFDesign
  Protein hallucination and inpainting with RoseTTAFold
  ☆245Updated last year
• dauparas / LigandMPNN
  ☆233Updated 5 months ago
• Kuhlman-Lab / ThermoMPNN
  GNN trained to predict changes in thermodynamic stability for protein point mutants
  ☆125Updated 2 months ago
• ChatMol / ChatMol
  ChatMol
  ☆162Updated 3 months ago
• luwei0917 / DynamicBind
  repo for DynamicBind: Predicting ligand-specific protein-ligand complex structure with a deep equivariant generative model
  ☆199Updated 6 months ago
• LPDI-EPFL / masif_seed
  Masif seed paper repository
  ☆137Updated last year
• SysBioChalmers / DLKcat
  Deep learning and Bayesian approach applied to enzyme turnover number for the improvement of enzyme-constrained genome-scale metabolic mo…
  ☆132Updated last year
• bcov77 / silent_tools
  A bunch of shell utilities for dealing the silent files
  ☆53Updated 4 months ago
• varun-shanker / structural-evolution
  ☆82Updated 4 months ago
• MengwuXiao / GetBox-PyMOL-Plugin
  A PyMOL Plugin for calculating docking box for LeDock, AutoDock and AutoDock Vina.
  ☆85Updated 5 years ago
• Valdes-Tresanco-MS / AutoDockTools_py3
  Python3 translation of AutoDockTools
  ☆100Updated 5 months ago
• patrickbryant1 / Umol
  Protein-ligand structure prediction
  ☆205Updated 3 months ago
• HWaymentSteele / AF_Cluster
  Predict multiple protein conformations using sequence clustering and AlphaFold2.
  ☆135Updated 2 months ago