Alternatives and similar repositories for pyrosetta-basic:

Users that are interested in pyrosetta-basic are comparing it to the libraries listed below

• ProteinDesignLab / protein-design-tutorials
  Tutorials, cheat sheets, and other resources for computational methods for protein design.
  ☆110Updated last year
• rifdock / rifdock
  Rifdock Library for Conformational Search
  ☆152Updated 10 months ago
• bjornwallner / DockQ
  DockQ is a single continuous quality measure for Protein, Nucleic Acids and Small Molecule Docking Models
  ☆261Updated 2 months ago
• Kortemme-Lab / flex_ddG_tutorial
  ☆104Updated 2 years ago
• ikalvet / heme_binder_diffusion
  ☆114Updated 5 months ago
• JeffSHF / ColabDock
  Code for ColabDock paper
  ☆137Updated 5 months ago
• RosettaCommons / RFDesign
  Protein hallucination and inpainting with RoseTTAFold
  ☆253Updated last year
• zhanghaicang / carbonmatrix_public
  ☆110Updated last week
• hefeda / design_tools
  A compilation of deep learning methods for protein design
  ☆97Updated 2 years ago
• RosettaCommons / DeepAb
  Deep learning models and structure realization scripts for the DeepAb antibody structure prediction method.
  ☆159Updated 2 years ago
• Kuhlman-Lab / ThermoMPNN
  GNN trained to predict changes in thermodynamic stability for protein point mutants
  ☆152Updated last month
• prihoda / AbNumber
  Convenience Python APIs for antibody numbering using ANARCI
  ☆94Updated last month
• Luo-SynBioLab / UniKP
  ☆64Updated last year
• Merck / BioPhi
  BioPhi is an open-source antibody design platform. It features methods for automated antibody humanization (Sapiens), humanness evaluatio…
  ☆176Updated 6 months ago
• fhalab / MLDE
  A machine-learning package for navigating combinatorial protein fitness landscapes.
  ☆123Updated 3 years ago
• HWaymentSteele / AF_Cluster
  Predict multiple protein conformations using sequence clustering and AlphaFold2.
  ☆149Updated 3 weeks ago
• nrbennet / dl_binder_design
  ☆293Updated 7 months ago
• bcov77 / silent_tools
  A bunch of shell utilities for dealing the silent files
  ☆56Updated 2 weeks ago
• MengwuXiao / GetBox-PyMOL-Plugin
  A PyMOL Plugin for calculating docking box for LeDock, AutoDock and AutoDock Vina.
  ☆91Updated 5 years ago
• oxpig / ImmuneBuilder
  Predict the structure of immune receptor proteins
  ☆132Updated last month
• Wang-Lin-boop / CADD-Scripts
  Scripts for virtual screening, cross docking and protein relax using Schrödinegr and Rosetta
  ☆70Updated last week
• Valdes-Tresanco-MS / AutoDockTools_py3
  Python3 translation of AutoDockTools
  ☆114Updated 9 months ago
• rdk / p2rank
  P2Rank: Protein-ligand binding site prediction from protein structure based on machine learning.
  ☆294Updated last week
• CAODH / SurfDock
  SurfDock is a Surface-Informed Diffusion Generative Model for Reliable and Accurate Protein-ligand Complex Prediction
  ☆154Updated last week
• luwei0917 / DynamicBind
  repo for DynamicBind: Predicting ligand-specific protein-ligand complex structure with a deep equivariant generative model
  ☆228Updated 10 months ago
• dauparas / LigandMPNN
  ☆295Updated last month
• haddocking / prodigy
  Predict the binding affinity of protein-protein complexes from structural data
  ☆119Updated 5 months ago
• jertubiana / ScanNet
  ☆121Updated last year
• patrickbryant1 / Umol
  Protein-ligand structure prediction
  ☆212Updated 7 months ago