Bioinformatics scripts for genome analysis
☆17Oct 26, 2022Updated 3 years ago
Alternatives and similar repositories for sesbio
Users that are interested in sesbio are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Guide to transcriptome assembly & analysis☆21Apr 12, 2017Updated 9 years ago
- ☆12Jun 12, 2023Updated 2 years ago
- Codes for Vmap1.1 and Vmap3☆11Jan 5, 2026Updated 4 months ago
- ☆11Mar 14, 2026Updated last month
- Cookiecutter for snakemake slurm profile☆15Jul 22, 2023Updated 2 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Set of script for the paper on the cattle graph genome☆14Jan 10, 2023Updated 3 years ago
- scripts for the project of seven thaliana genomes assembly☆42May 22, 2021Updated 4 years ago
- De novo lncRNA discovery pipeline, re-write of PLAR in shell and awk☆10Aug 2, 2023Updated 2 years ago
- ☆11Sep 28, 2021Updated 4 years ago
- ☆18Oct 4, 2023Updated 2 years ago
- ☆13May 16, 2016Updated 9 years ago
- small scripts, functions or bits of code for parsing genomic data☆14Sep 24, 2022Updated 3 years ago
- This is a basic repository with all the scripts necessary to reconstruct the data analysis from our work on the 200 Genomes☆12Aug 31, 2018Updated 7 years ago
- Scripts for Hill et al. (2022) doi:10.1093/molbev/msac085 🟣☆11Apr 28, 2023Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Scripts for reformatting data. Mainly from tab separated to an esoteric program specific format☆13Mar 19, 2026Updated last month
- Python Scripts for Bioinformatics☆15Apr 24, 2024Updated 2 years ago
- Creates an N-chart for comparing assembly lengths, including script for counting assembly lengths from a fasta file☆13Feb 2, 2017Updated 9 years ago
- An R package to detect selection in biological pathways☆14Jan 19, 2024Updated 2 years ago
- ☆10Feb 25, 2024Updated 2 years ago
- A toolkit for annotation of transposable element families from unassembled sequence reads☆31Dec 19, 2025Updated 4 months ago
- A tool to visualize the haplotype pattern and various information in excel.☆24Mar 5, 2025Updated last year
- mdust from DFCI Gene Indices Software Tools (archived for a historical record only)☆11Jan 2, 2015Updated 11 years ago
- Main scripts and commands used to analyze goat population genetic and domestication☆19Mar 25, 2019Updated 7 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Population Assignment using Genetic, Non-genetic or Integrated Data in a Machine-learning Framework. Methods in Ecology and Evolution.…☆16Sep 12, 2025Updated 7 months ago
- Perform GWAS with gemma in a simple pipeline☆27Apr 26, 2025Updated last year
- Repository☆10Oct 23, 2024Updated last year
- A python package for the identification of lncRNA from the assembled novel transcripts☆17Oct 28, 2021Updated 4 years ago
- This is something I have decided to do to make something good come out of the current covid situation. Here I will put the publicly avail…☆12Sep 6, 2021Updated 4 years ago
- easy_sbatch - Batch submitting Slurm jobs with script templates☆16Dec 28, 2021Updated 4 years ago
- ☆24Jul 29, 2025Updated 9 months ago
- Repo to analyze population genetic data with many different methods☆15Oct 23, 2019Updated 6 years ago
- Small and simple scripts useful for various bioinformatics purposes e.g. extract sequences from fasta files, rename fasta files (prefix a…☆23Oct 21, 2025Updated 6 months ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- ☆30Oct 14, 2022Updated 3 years ago
- BayeScEnv is a Fst-based, genome-scan method that uses environmental variables to detect local adaptation.☆19Aug 29, 2017Updated 8 years ago
- An RNA-Seq data exploration tool that shows read map coverage of a gene of interest along with a coloured "electronic fluorescent pictog…☆13Feb 26, 2026Updated 2 months ago
- Gene Prediction using MAKER, CEGMA, SNAP, GENEMARK & AUGUSTUS☆10Jul 20, 2017Updated 8 years ago
- Tools for inference of the DFE with dadi☆15Apr 16, 2021Updated 5 years ago
- My R scripts, primarily R plotting scripts + some genomics software including 16S rRNA metataxnomics and RNAseq☆12Dec 19, 2022Updated 3 years ago
- PhenomeXcan: mapping the genome to the phenome through the transcriptome☆11Jun 28, 2020Updated 5 years ago