NBISweden / workshop-reproducible-researchView external linksLinks
NBIS/Elixir course: Tools for Reproducible Research
☆68Jan 26, 2026Updated 3 weeks ago
Alternatives and similar repositories for workshop-reproducible-research
Users that are interested in workshop-reproducible-research are comparing it to the libraries listed below
Sorting:
- Geared towards life scientists wanting to be able to understand and use basic statistical and machine learning methods☆16Jan 19, 2026Updated 3 weeks ago
- Development guidlines for software within NBIS.☆18Jul 1, 2025Updated 7 months ago
- An assembly workflow for analysing data in the Earth Biogenome Project pilot project.☆15Jan 16, 2026Updated last month
- Adapters for trimming☆30Jan 30, 2019Updated 7 years ago
- NBIS workshop in Neural Nets and Deep Learning☆19May 23, 2024Updated last year
- A tutorial for the free Inkscape cross-platform vector graphics editor.☆13Oct 4, 2016Updated 9 years ago
- ☆13Mar 12, 2020Updated 5 years ago
- PTa Analysis TOolkit☆14Dec 11, 2025Updated 2 months ago
- ☆12Jan 15, 2021Updated 5 years ago
- Fit phenomenological sigmoid and impulse curves with priors to improve interpretability☆10May 29, 2024Updated last year
- nf-test utility functions☆12Updated this week
- GitHub repository for GenErode, a Snakemake workflow for the analysis of whole-genome sequencing data from historical and modern samples …☆29Feb 4, 2026Updated last week
- ☆11Jan 20, 2020Updated 6 years ago
- MOJITOO: a fast and universal method for integration of multimodal single cell data☆11Oct 23, 2024Updated last year
- R interface to megadepth: BigWig and BAM related utilities☆12Dec 12, 2024Updated last year
- Bulk (CP/GZ) and single-cell Iso-Seq in the developing human brain☆16May 30, 2024Updated last year
- A collection of resources and knowledge for analysis of scATAC+scRNA multi omics data☆10Sep 16, 2022Updated 3 years ago
- EDA, QC, and DESeq2 / edgeR analysis of 109 RNA-seq samples of immunotherapy treatment☆55May 25, 2023Updated 2 years ago
- Snakemake workflow to benchmark scRNA-seq data simulators☆14Aug 10, 2022Updated 3 years ago
- ☆23Jul 31, 2018Updated 7 years ago
- PCA in rust☆16Jul 30, 2023Updated 2 years ago
- Workflow management with Nextflow and nf-core☆29Jan 21, 2025Updated last year
- R and RStudio via conda packages in repo2docker☆32Jul 24, 2024Updated last year
- Single cell RNA sequencing analysis course☆237Jan 9, 2026Updated last month
- minimal example implementations for bioinformatics workflow managers☆280Oct 27, 2021Updated 4 years ago
- Class materials for the NIH HPC snakemake class☆15Sep 27, 2024Updated last year
- ☆16Oct 2, 2023Updated 2 years ago
- A fast, easy way to present complex bioinformatics pipelines to biologists☆11Sep 28, 2018Updated 7 years ago
- UZH Epi/Biostat Methods Seminar Spring 2020: Deep Learning☆13May 7, 2020Updated 5 years ago
- Workshop • Analysis of RNA-seq data☆37Mar 15, 2024Updated last year
- A collection of unexpected challenges and learnings with nextflow and nf-core.☆42Oct 17, 2023Updated 2 years ago
- A curated list of bioinformatics bench-marking papers and resources.☆15Nov 27, 2019Updated 6 years ago
- ☆20Feb 27, 2013Updated 12 years ago
- A quantitative framework for evaluating data structure preservation by dimensionality reduction techniques☆16Jun 1, 2021Updated 4 years ago
- Data Science Operations (dso) command line tool☆46Sep 8, 2025Updated 5 months ago
- Codes used for all the data analysis steps in the paper "Single-cell transcriptomics identifies an effectorness gradient shaping the resp…☆16Apr 15, 2020Updated 5 years ago
- Statistical and computational analysis of the human genome☆15Sep 22, 2021Updated 4 years ago
- Version 2.1.0 released☆23Sep 16, 2019Updated 6 years ago
- Dimensionality reduction and batch integration methods for single cell data☆16Feb 9, 2023Updated 3 years ago