NIH-HPC / snakemake-class
Class materials for the NIH HPC snakemake class
☆16Updated 4 months ago
Alternatives and similar repositories for snakemake-class:
Users that are interested in snakemake-class are comparing it to the libraries listed below
- Tutorial for working with cloud infrastructure and AWS from R☆20Updated 7 years ago
- SEQprocess: a modularized and customizable pipeline framework for NGS processing in R package☆17Updated 4 years ago
- Intro to workflows for efficient automated data analysis, using snakemake.☆32Updated 5 years ago
- Intro to R and RStudio for Genomics☆28Updated this week
- BigWig manpulation tools using libBigWig and htslib☆29Updated 6 months ago
- GitHub Action to launch a workflow using Nextflow Tower.☆12Updated last year
- DEvis: an R package for aggregation and visualization of differential expression data☆20Updated 4 years ago
- Elastic, reproducible, and reusable genomic data science tools from R backed by cloud resources☆34Updated 3 years ago
- An interactive learning resource for next-generation sequencing (NGS) techniques☆28Updated 6 years ago
- RNA-seq data comprehensive data analysis toolbox☆19Updated 2 years ago
- Modular blocks to build Snakemake workflows for reproducible NGS analyses☆22Updated 5 years ago
- MuSiCa - Mutational Signatures in Cancer☆23Updated last year
- Interactive Differential Expression AnaLysis - DE made accessible and reproducible☆29Updated 2 months ago
- Integrate the cancer genomics portal, cBioPortal, using MultiAssayExperiment☆33Updated last week
- A Practical (And Opinionated) Guide To Analyzing 450K Data☆35Updated 10 years ago
- Template for building a bioconductor workshop package using github actions☆20Updated 7 months ago
- Subclonal Hierarchy Inference from Somatic Mutations☆21Updated 5 years ago
- The official repository of the Bioconductor 2019 Conference Workshops☆25Updated last year
- Distinguishing between generic and experiment-specific gene expression signals.☆12Updated 2 years ago
- ☆19Updated 2 years ago
- A standalone interactive application for detecting biological significance on a set of genes☆40Updated 3 years ago
- deepStats: a stastitical toolbox for deeptools and genomic signals☆34Updated 3 years ago
- Public data resources and Bioconductor: The goal of this workshop is to introduce Bioconductor packages for finding, accessing, and using…☆14Updated last month
- ☆13Updated 7 years ago
- Introduction to the Bioconductor project☆18Updated this week
- The vignette provided has a basic sketch of the steps we interactively will go through to build a package with devtools, explains version…☆11Updated 4 years ago
- Lollipop-diagram to interactively visualize genetic mutations☆31Updated 5 months ago
- R Interface to the NCBI SRA metadata☆23Updated 6 years ago
- Bioconductor package that makes BIG data pint-sized.☆20Updated last year
- anor: an annotation and visualization system based on R and Shiny framework☆33Updated 4 years ago