☆16Oct 2, 2023Updated 2 years ago
Alternatives and similar repositories for workshop-spatial
Users that are interested in workshop-spatial are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A pipeline to transform images into valuable analysis items☆18Updated this week
- Notebooks in computational metabolomics☆15Feb 3, 2025Updated last year
- Detecting NUMTs from WGS☆13Nov 19, 2023Updated 2 years ago
- ☆13Dec 20, 2025Updated 4 months ago
- Beginning of a textbook for shell skills for bioinformatics☆11Oct 7, 2025Updated 6 months ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- ☆12Mar 27, 2026Updated last month
- single RNA-seq analysis of human keloid samples☆12May 25, 2021Updated 4 years ago
- Hands-on training on the latest methodologies and applications for the analysis of nucleic acids from eukaryotic single cells☆17Jul 26, 2024Updated last year
- Detect and phase minor SNVs from long-read sequencing data☆14Dec 28, 2021Updated 4 years ago
- NanoSim-H: a simulator of Oxford Nanopore reads; a fork of NanoSim.☆18Sep 7, 2022Updated 3 years ago
- Tools for detecting alternative splicing events and genotype in single-cell gene expression data.☆15Jan 16, 2024Updated 2 years ago
- Human mitochondrial variants annotation using HmtVar.☆18Oct 16, 2023Updated 2 years ago
- ☆17Mar 6, 2024Updated 2 years ago
- Repository for the paper "The impact of package selection and versioning on single-cell RNA-seq analysis"☆21Nov 27, 2025Updated 5 months ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Source codes and examples for DeepPrime☆14Dec 17, 2024Updated last year
- R-based Xenium Spatial Analysis Toolkit to assess gene expression gradients☆35Apr 9, 2026Updated 3 weeks ago
- Workshops on Computational Biology organized by our lab☆10Mar 25, 2024Updated 2 years ago
- a guideRNA database generation tool☆18Mar 3, 2025Updated last year
- Software Pipeline for Integrative Genetic Association Analysis: Probabilistic Assessment of Enrichment and Colocalization☆27Oct 29, 2019Updated 6 years ago
- STHD: probabilistic cell typing of Single spots in whole Transcriptome spatial data with High Definition☆37Apr 30, 2025Updated last year
- dsNickFury is for comparing a CRISPR target site against all other potential sites in a genome. Orchid is a package I'm developing to go…☆13Mar 26, 2018Updated 8 years ago
- This repository will host a (continously updated) list of various deep learning methods used in different stages of spatial transcriptomi…☆44Feb 9, 2023Updated 3 years ago
- ☆13Aug 9, 2022Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- off-targeting assessment of Cas9 gRNAs☆15Apr 27, 2021Updated 5 years ago
- MOJITOO: a fast and universal method for integration of multimodal single cell data☆12Oct 23, 2024Updated last year
- Visualization tool for temporal clonal evolution.☆18Mar 13, 2020Updated 6 years ago
- Image augmentation library in Python for machine learning.☆13Mar 9, 2020Updated 6 years ago
- Package to Score Sequences using Rule Set 3☆15Nov 10, 2025Updated 5 months ago
- ☆32Apr 24, 2026Updated last week
- ☆14Oct 24, 2025Updated 6 months ago
- ☆35Dec 22, 2024Updated last year
- spatialDLPFC project involving Visium (n = 30), Visium SPG (n = 4) and snRNA-seq (n = 19) samples☆31Mar 26, 2026Updated last month
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Simple 3D or 2D OpenGL viewer with mouse rotation, pan, zoom and some object selection.☆18Dec 13, 2018Updated 7 years ago
- Contains hands-on example code for [O'reilly book "Deep Learning At Scale"](https://www.oreilly.com/library/view/deep-learning-at/9781098…☆31Jun 15, 2024Updated last year
- RAPID: a Real-time, GPU-Accelerated Parallelized Image processing software for large-scale multiplexed fluorescence microscopy Data☆12Dec 3, 2022Updated 3 years ago
- ☆14Feb 12, 2026Updated 2 months ago
- ☆41Oct 24, 2025Updated 6 months ago
- Central repository for the Multiplexed Tissue Imaging Workshop 2023.☆10Jan 9, 2023Updated 3 years ago
- Repo for my course PSY6135: Psychology of Data Visualization☆12May 3, 2025Updated 11 months ago