boulderrinnlab / CLASS_2021Links
Statistical and computational analysis of the human genome
☆15Updated 4 years ago
Alternatives and similar repositories for CLASS_2021
Users that are interested in CLASS_2021 are comparing it to the libraries listed below
Sorting:
- Query the gene models of a given organism/assembly☆27Updated 2 months ago
- Best practice RNA-Seq analysis pipeline for reference-based RNA-Seq analysis☆40Updated 4 years ago
- Merge fastq files split over lanes☆20Updated 7 years ago
- a set of NGS pipelines☆24Updated last week
- Analysis and Interpretation of Bulk RNA-Seq Data using Bioconductor☆25Updated this week
- 📊 An R package of RNA-seq workflow☆15Updated 3 years ago
- RNA-seq analysis scripts☆15Updated 3 months ago
- This is a repository to help make plots similar to Figure 2 in https://www.biorxiv.org/content/10.1101/388165v3☆13Updated 6 years ago
- DTU analysis tool inspired by llamas☆10Updated 2 weeks ago
- Readme☆10Updated 5 years ago
- Scripts for plotting figures and running analysis throughout the manuscript☆11Updated 3 years ago
- ☆22Updated last year
- Interactive R package to quantify, analyse and visualise alternative splicing☆37Updated this week
- An R/Bioconfuctor package for association analysis of genomic regions based on permutation tests☆13Updated 4 months ago
- R package wrapping bedtools☆44Updated 7 months ago
- Relative Abundance of Transcripts: An R package for the detection of Differential Transcript isoform Usage.☆34Updated 3 years ago
- deepStats: a stastitical toolbox for deeptools and genomic signals☆34Updated 4 years ago
- workshop website on readthedocs☆20Updated 3 weeks ago
- Bulk RNA-seq Data Processing, Quality Control, and Downstream Analysis Pipeline☆20Updated 9 months ago
- A repository containing various scripts useful for performing quality control on data from genome-wide association studies and visualizin…☆20Updated 8 years ago
- Docker container for genomics analyses in R.☆25Updated last year
- Geared towards life scientists wanting to be able to understand and use basic statistical and machine learning methods☆16Updated 4 months ago
- An R for fast and flexible DNA methylation analysis☆34Updated 2 weeks ago
- RNA-seq for Mendelian disease diagnostics: A hands-on tutorial through bioinformatic tools and workflows☆17Updated 3 years ago
- Motif manipulation functions for R.☆30Updated 2 weeks ago
- Provides Quality Control of sequencing samples by deducing if there is batch effect and adjusts for it.☆35Updated 2 years ago
- An R interface to the MEME Suite☆52Updated 4 months ago
- VarGen is an R package designed to get a list of variants related to a disease. It just need an OMIM morbid ID as input and optionally a…☆17Updated last year
- ☆29Updated 6 years ago
- Method for Identifying Novel Transcripts and Isoforms using Equivalence classes, in cancer and rare disease.☆36Updated last year