calico / impulseLinks
Fit phenomenological sigmoid and impulse curves with priors to improve interpretability
☆10Updated last year
Alternatives and similar repositories for impulse
Users that are interested in impulse are comparing it to the libraries listed below
Sorting:
- A Grammar of Data Manipulation for Omics Data☆21Updated 4 years ago
- Semi-parametric simulation of bulk and single cell RNA-seq data☆10Updated 8 months ago
- Various Ideas for Confounder Adjustment in Regression☆24Updated 2 years ago
- ☆14Updated last year
- Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects☆44Updated 2 weeks ago
- SEQprocess: a modularized and customizable pipeline framework for NGS processing in R package☆17Updated 5 years ago
- ☆12Updated 6 years ago
- Examples of kallisto + sleuth☆11Updated 8 years ago
- Archived version of RUVSeq☆8Updated 8 years ago
- Interactive benchmarking of ranking and assignment methods☆16Updated 3 weeks ago
- Single sample network reconstruction in R☆22Updated 5 years ago
- A Suite of Packages for Analysis of Big Genomic Data☆34Updated 6 months ago
- Client to access ExperimentHub resources☆10Updated 3 weeks ago
- Read RDS files, in Python☆26Updated last week
- Template for building a bioconductor workshop package using github actions☆20Updated last month
- The vignette provided has a basic sketch of the steps we interactively will go through to build a package with devtools, explains version…☆11Updated 5 years ago
- Gene network analysis☆19Updated 2 years ago
- Bayesian modelling of DNA methylation heterogeneity at single-cell resolution☆23Updated last year
- R scripts for analyzing the 1.3 million brain cell data set from 10X Genomics☆12Updated 2 years ago
- Extracting mutational signatures via LASSO. The manuscript of the method is published on PLOS Computational Biology and available at: htt…☆11Updated 3 months ago
- Machine learning use cases for teaching☆13Updated 8 years ago
- Assessing the increase in power from increasing read depth in a given RNA-Seq study☆13Updated 6 years ago
- scRNA-seq data visualization from scrattch☆26Updated 3 months ago
- ☆16Updated 8 years ago
- ☆14Updated 2 years ago
- The official Inferelator repository maintained by current or former Bonneau lab members☆9Updated 8 years ago
- iDEP: integrated Differential Expression & Pathway analysis☆14Updated 6 years ago
- Annotating epigenetic variation among samples with region sets in R☆11Updated 6 months ago
- Onboarding materials for the Greene Lab☆31Updated 8 months ago
- The `multiGSEA` R package was designed to run a robust GSEA-based pathway enrichment for multiple omics layers.☆19Updated 3 months ago