Alternatives and similar repositories for pca:

Users that are interested in pca are comparing it to the libraries listed below

• nh13 / fqme
  ☆22Updated last month
• sstadick / bam-builder
  Wrapper over rust-htslib for building collections of BAM records for testing.
  ☆11Updated last year
• nlhepler / spoa-rs
  A rust wrapper for the spoa C++ partial order alignment library
  ☆10Updated 6 months ago
• vsbuffalo / genomap
  A Rust library for storing generic genomic data by sorted chromosome name
  ☆17Updated 4 months ago
• varfish-org / mehari
  VEP-like tool for sequence ontology and HGVS annotation of VCF files
  ☆17Updated this week
• kcleal / superintervals
  Fast interval intersection library
  ☆35Updated this week
• tanghaibao / rust-wfa2
  Rust binding for WFA2-lib
  ☆10Updated 2 years ago
• wang-q / intspan
  Command line tools for IntSpan related bioinformatics operations
  ☆13Updated 2 weeks ago
• 38 / pyd4
  The python binding for D4 format
  ☆16Updated 3 years ago
• vsbuffalo / hgindex
  Hierarchical binned indexed data store for on-disk genomic data.
  ☆14Updated last week
• brentp / pbr
  drunk on perbase pileups and lua expressions
  ☆17Updated last year
• edawson / svaha2
  Linear-time, low-memory construction of variation graphs
  ☆18Updated 4 years ago
• iqbal-lab-org / minos
  Variant call adjudication
  ☆16Updated 7 months ago
• ChaissonLab / hmcnc
  Hidden Markov Model based Copy number caller
  ☆20Updated 3 months ago
• rust-seq / minimizer-iter
  Iterate over minimizers of a DNA sequence
  ☆27Updated 6 months ago
• 10XGenomics / fastq_set
  Tools for working FASTQ files from sequencers (R1/R2/I1/I2)
  ☆13Updated last month
• mskilab-org / pgv
  Pan gGnome Viewer
  ☆10Updated 11 months ago
• 10XGenomics / rust-bwa
  Rust wrapper of the BWA C API
  ☆18Updated 3 years ago
• dellytools / maze
  maze: match visualizer
  ☆9Updated 3 years ago
• pangenome / pgvf-spec
  Pangenome Graph Variation Format (PGVF)
  ☆18Updated 4 years ago
• pjedge / rust-spoa
  Rust crate with bindings and interface to the SPOA library for generating consensus sequences.
  ☆10Updated 5 years ago
• MoinSebi / gSV
  ☆11Updated 2 years ago
• brianli314 / palindrome-finder
  A bioinformatics tool written in Rust to find palindromic sequences in DNA
  ☆34Updated this week
• jaudoux / kamix
  Index and query k-mer matrices in BGZF
  ☆12Updated 6 years ago
• hanzou666 / msa2gfa
  A script to extract graph structure from multiple sequence alignment result and output as GFA/JSON for vg
  ☆11Updated 5 years ago
• moold / kseq-rs
  A FASTA/FASTQ format parser library
  ☆20Updated 10 months ago
• luizirber / ukhs
  Universal K-mer Hitting Set library in Rust
  ☆10Updated 4 years ago
• sstadick / rumi
  Rust UMI Directional Adjacency Deduplicator
  ☆14Updated 5 years ago
• NickRoz1 / gbam
  ☆12Updated 2 weeks ago
• gregorykucherov / spaced-seeds-for-metagenomics
  ☆14Updated 9 years ago