dongxuemin666 / RNA-combineLinks
RNA-seq data comprehensive data analysis toolbox
☆19Updated 2 years ago
Alternatives and similar repositories for RNA-combine
Users that are interested in RNA-combine are comparing it to the libraries listed below
Sorting:
- deepStats: a stastitical toolbox for deeptools and genomic signals☆34Updated 4 years ago
- interactive plots for differential expression analysis☆34Updated 2 months ago
- Chromatin ACcessibility and Transcriptomics Unifying Software☆17Updated 10 months ago
- Interactive eQTL visualizations☆13Updated 2 years ago
- Differential ATAC-seq toolkit☆27Updated last year
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆42Updated 3 years ago
- A set of tools to annotate VCF files with expression and readcount data☆29Updated 6 months ago
- Pairtree is a method for reconstructing cancer evolutionary history in individual patients, and analyzing intratumor genetic heterogeneit…☆38Updated last year
- Pipeline for the identification of cancer-related mutations from RNA-seq data☆14Updated 4 years ago
- Calculate and plot distributions of genomic ranges☆26Updated 4 months ago
- Build single sample pair-based (rule-based) classifiers using top-score pairs or random forest for multi-class problems.☆12Updated 2 years ago
- An Integrated Analysis Pipeline for Unbiased ChIP seq Analysis☆22Updated 11 months ago
- Bulk RNA-seq Data Processing, Quality Control, and Downstream Analysis Pipeline☆20Updated 8 months ago
- Differential gene expression analysis and pathway analysis of RNAseq data☆32Updated 2 months ago
- Converts 'MultiQC' Reports into Tidy Data Frames☆18Updated last year
- a Shiny/R application to view and annotate copy number variations☆28Updated 2 years ago
- Create a cromphensive report of DEG list coming from any analysis of RNAseq data☆26Updated last year
- DriverPower☆26Updated 7 months ago
- Clonal and subclonal Copy Number Alteration quality check integrating somatic mutation☆22Updated 3 months ago
- A Snakemake pipeline for quality control and reproducible processing of chromatin profiling data☆20Updated 4 years ago
- ☆23Updated 6 months ago
- 📊 An R package of RNA-seq workflow☆15Updated 3 years ago
- Relative Abundance of Transcripts: An R package for the detection of Differential Transcript isoform Usage.☆34Updated 3 years ago
- 🧭 Navigate single-cell RNA-seq datasets in your web browser.☆29Updated 2 years ago
- Method for Identifying Novel Transcripts and Isoforms using Equivalence classes, in cancer and rare disease.☆36Updated last year
- Targeted and non-targeted anticancer drugs and drug regimens☆29Updated this week
- ☆28Updated 2 years ago
- A small R package to make sequencing read coverage plots in R.☆39Updated 3 years ago
- Comprehensive Human Expressed SequenceS☆18Updated 2 months ago
- scpca-nf is the Nextflow workflow for processing Single-cell Pediatric Cancer Atlas Portal data☆15Updated this week