dongxuemin666 / RNA-combine

Related projects: ⓘ

• jsalignon / cactus
  Chromatin ACcessibility and Transcriptomics Unifying Software
  ☆13Updated 2 months ago
• hasaru-k / GlimmaV2
  interactive plots for differential expression analysis
  ☆25Updated 2 weeks ago
• griffithlab / VAtools
  A set of tools to annotate VCF files with expression and readcount data
  ☆25Updated 2 weeks ago
• statgen / fivex
  Interactive eQTL visualizations
  ☆13Updated last year
• Kingsford-Group / squid
  SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data
  ☆40Updated 2 years ago
• zanglab / SICER2
  ☆20Updated 6 months ago
• khuranalab / CompositeDriver
  Combined mutation recurrence and functional impact to identify coding and non-coding cancer drivers
  ☆15Updated 5 years ago
• morrislab / pairtree
  Pairtree is a method for reconstructing cancer evolutionary history in individual patients, and analyzing intratumor genetic heterogeneit…
  ☆37Updated 5 months ago
• Oshlack / MINTIE
  Method for Identifying Novel Transcripts and Isoforms using Equivalence classes, in cancer and rare disease.
  ☆33Updated 2 months ago
• Dowell-Lab / DAStk
  Differential ATAC-seq toolkit
  ☆27Updated 8 months ago
• smshuai / DriverPower
  DriverPower
  ☆25Updated 3 months ago
• lkuchenb / MultiHLA
  WES HLA Typing based on multiple alternative tools
  ☆15Updated 3 years ago
• genemine / iread
  iread
  ☆23Updated 3 years ago
• julienrichardalbert / MEA
  ☆9Updated 4 years ago
• kircherlab / CADD-SV
  CADD-SV – a framework to score the effect of structural variants
  ☆14Updated last week
• epigen / open_pipelines
  Pipelines for NGS data preprocessing by the Bock lab and friends
  ☆20Updated 2 years ago
• zhongw2 / GeneTEFlow
  ☆23Updated 3 years ago
• oicr-gsi / sequenza
  Workflow for Sequenza, cellularity and ploidy
  ☆16Updated 2 months ago
• NCBI-Hackathons / HLAClustRView
  R package specialized in HLA typing clustering and visualization based on specific similarity metrics
  ☆12Updated 4 years ago
• thelovelab / fishpond
  Differential expression and allelic analysis, nonparametric statistics
  ☆27Updated last year
• lpantano / DEGreport
  Create a cromphensive report of DEG list coming from any analysis of RNAseq data
  ☆23Updated 6 months ago
• umccr / vcf_stuff
  📊Evaluating, filtering, comparing, and visualising VCF
  ☆26Updated last year
• FNL-MoCha / nextgenseq_pipeline
  Exome/Capture/RNASeq Pipeline Implementation using snakemake
  ☆18Updated 4 years ago
• guigolab / bamstats
  A command line tool to compute mapping statistics from a BAM file
  ☆21Updated 2 years ago
• TRON-Bioinformatics / splice2neo
  R package to analyze aberrant splicing junctions in tumor samples to identify neoepitopes
  ☆13Updated last month
• NBISweden / workshop-mlbiostatistics
  ☆15Updated this week
• kgori / sigfit
  Flexible Bayesian inference of mutational signatures
  ☆33Updated last year
• knausb / vcfR_documentation
  Documentation for vcfR
  ☆10Updated last year
• djhn75 / RNAEditor
  ☆14Updated 2 years ago
• lcalviell / ORFquant
  An R package for Splice-aware quantification of translation using Ribo-seq data
  ☆15Updated 8 months ago