A fast, easy way to present complex bioinformatics pipelines to biologists
☆12Sep 28, 2018Updated 7 years ago
Alternatives and similar repositories for FlowBio
Users that are interested in FlowBio are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Luslab nextflow modules☆14Apr 30, 2021Updated 5 years ago
- An ATAC-seq pipeline wrapped in NextFlow that can be run by Jupyter☆14Jan 18, 2019Updated 7 years ago
- Analyze a set of genomes with the anvi'o pangenome pipeline☆16Oct 11, 2023Updated 2 years ago
- A data processing platform for ChIP-seq, RNA-seq, MNase-seq, DNase-seq, ATAC-seq and GRO-seq datasets. Please ignore information on ciphe…☆19Dec 22, 2017Updated 8 years ago
- "The who the what the huh?" is our pipeline for converting bcl files to fastq and performing QC.☆11Sep 19, 2022Updated 3 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Taxonomic Classification of Bacteria and Archaea Genomes☆19May 20, 2026Updated 2 months ago
- NovoGraph: building whole genome graphs from long-read-based de novo assemblies☆46Feb 23, 2021Updated 5 years ago
- ☆64Sep 21, 2016Updated 9 years ago
- Search public databases for given genotypic information☆12Mar 21, 2018Updated 8 years ago
- Master of Pores 2☆23Dec 4, 2024Updated last year
- Command line tool for Wave containers provisioning service☆19Jul 24, 2026Updated 2 weeks ago
- This pipeline has moved! Please see:☆11Mar 12, 2018Updated 8 years ago
- Short course using RStudio for biological data analysis☆14Jul 7, 2022Updated 4 years ago
- A collection of modules and sub-workflows for Nextflow☆29Feb 13, 2026Updated 5 months ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Automatic Packaging and Distribution of Bioinformatics Pipelines☆26Sep 29, 2017Updated 8 years ago
- A series of scripts to automate sequence workflows☆18Jul 16, 2026Updated 3 weeks ago
- Docker images of bioinformatics software☆21Jun 15, 2017Updated 9 years ago
- ☆14Nov 11, 2022Updated 3 years ago
- TheSparkBox is an all-in-one Spark deployment that you can use to fire up a local cluster.☆12Jun 26, 2018Updated 8 years ago
- Tools for inference of the DFE with dadi☆15Apr 16, 2021Updated 5 years ago
- The documentation for the Clustergrammer project☆10Oct 21, 2020Updated 5 years ago
- Demonstrating the PRoot program☆11Jul 29, 2016Updated 10 years ago
- Example Nextflow pipelines and programming techniques☆109May 20, 2026Updated 2 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Whole Exome/Whole Genome Sequencing alignment pipeline☆30Sep 18, 2024Updated last year
- Viral Identification and Discovery - A viral characterization pipeline built in Nextflow.☆11May 19, 2020Updated 6 years ago
- IPAW: a Nextflow workflow for proteogenomics☆29Aug 8, 2024Updated 2 years ago
- Short idioms and patterns for transforming, merging and managing files and channels in Nextflow.☆17Jul 27, 2025Updated last year
- Nextflow workflow for automatic repeat detection, classification and masking☆13Feb 19, 2018Updated 8 years ago
- Fast and scalable inference for single-cell differential gene expression of multiple patients☆15Jul 3, 2026Updated last month
- Subset of fast5 files contained in a fastq, BAM, or SAM file.☆11Mar 29, 2023Updated 3 years ago
- A message queue for genomic surveillance☆20Oct 14, 2021Updated 4 years ago
- ☆10Aug 4, 2020Updated 6 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- This repository has been archived, currently maintained version is at https://github.com/iii-companion/companion☆21Mar 22, 2021Updated 5 years ago
- Bioinformatics analysis scripts, workflows, general code examples☆57Feb 19, 2021Updated 5 years ago
- A command line program for large scale buffering between piped programs☆17Nov 19, 2021Updated 4 years ago
- ☆15Apr 2, 2025Updated last year
- online notebooks for a review of genome sketching☆60Sep 23, 2019Updated 6 years ago
- BACTpipe: An assembly and annotation pipeline for bacterial genomics☆20Dec 3, 2024Updated last year
- FlowCraft: a component-based pipeline composer for omics analysis using Nextflow.☆251Aug 10, 2025Updated last year