gandallab / Dev_Brain_IsoSeqView external linksLinks
Bulk (CP/GZ) and single-cell Iso-Seq in the developing human brain
☆16May 30, 2024Updated last year
Alternatives and similar repositories for Dev_Brain_IsoSeq
Users that are interested in Dev_Brain_IsoSeq are comparing it to the libraries listed below
Sorting:
- Single-cell Iso Prep☆17Oct 28, 2023Updated 2 years ago
- ☆13Dec 22, 2025Updated last month
- ☆14Mar 17, 2022Updated 3 years ago
- ScisorWiz: Differential Isoform Visualizer for Long-Read RNA Sequencing Data☆20Apr 24, 2024Updated last year
- scRNA analysis of public dataset on bladder cancer☆19Dec 12, 2025Updated 2 months ago
- ☆20Feb 5, 2026Updated last week
- R package to calculate the Aneuploidy Score from Chromosome Arm-level SCNAs/Aneuploidies (CAAs) as outlined and expanded by Shukla et al.…☆16Feb 17, 2021Updated 4 years ago
- ORF Quantification pipeline for Alternative Splicing☆16May 11, 2021Updated 4 years ago
- ☆18Apr 18, 2024Updated last year
- An R package for Splice-aware quantification of translation using Ribo-seq data☆19Dec 20, 2023Updated 2 years ago
- Code for our paper: https://www.biorxiv.org/content/10.1101/528463v1☆18Apr 24, 2020Updated 5 years ago
- SCASA: Single cell transcript quantification tool☆22Nov 24, 2023Updated 2 years ago
- 10x snRNA-seq study on 5 postmortem human brain regions across the reward circuitry: NAc, AMY, sACC, DLPFC, and HPC☆25Jul 15, 2022Updated 3 years ago
- single-cell-Isoform-Sequencing-Analysis-Tools: New and powerful tools brings single-cell RNA sequencing to the Isoform level and single m…☆26Jul 20, 2024Updated last year
- material related to the genetech courses☆10Sep 11, 2023Updated 2 years ago
- The Isoforms from Single-Cell; Long-read Expression Suite☆37Jan 14, 2025Updated last year
- The Flexible Demultiplexer☆39Jan 9, 2026Updated last month
- ☆14Jun 24, 2024Updated last year
- An interactive shiny app for processing DIA-nn output (filtering, MaxLFQ, Top3, iBAQ, etc.)☆13Feb 4, 2026Updated last week
- Effects of Adherence to Mediterranean and MIND Diets, and the Mediating Effect of Metabolites on Risks of Overall and 22 Specific Cancers…☆13Apr 10, 2024Updated last year
- ☆11Jan 8, 2026Updated last month
- Code for the analysis performed in the paper "Transcription factor stoichiometry, motif affinity and syntax regulate single-cell chromati…☆12Oct 16, 2025Updated 3 months ago
- Python-based web scraper for extracting gene summaries from GeneCards.☆11Oct 3, 2024Updated last year
- ☆12Apr 29, 2024Updated last year
- Kinase-Substrate Enrichment Analysis (KSEA) App☆10May 2, 2017Updated 8 years ago
- A tool for investigating alternative mRNA splicing in next generation mRNA sequence data.☆11Mar 3, 2017Updated 8 years ago
- Pipeline of the structured life course modeling approach analysis☆12Nov 27, 2024Updated last year
- The ProteoCancer Analysis Suite (PCAS) utilizes the CPTAC database to integrate proteomics, phosphoproteomics, and transcriptomics for ca…☆21Jun 18, 2025Updated 7 months ago
- 在R语言中使用ChatGPT（中国大陆版）☆12Mar 17, 2023Updated 2 years ago
- R code for Combining gene mutation with gene expression data improves outcome prediction in myelodysplastic syndromes☆13Mar 23, 2016Updated 9 years ago
- Genome annotation with PacBio Iso-Seq. Takes raw subreads as input, generate Full Length Non Chemiric (FLNC) sequences and produce a bed …☆49Nov 20, 2025Updated 2 months ago
- scisorseqr is an R-package for processing of single-cell long read data and analyzing differential isoform expression across any two cond…☆43Mar 9, 2023Updated 2 years ago
- CaMP: Causal Multi-policy Planning for Interactive Navigation in Multi-room Scenes☆12Sep 2, 2024Updated last year
- A list of bioinformatic tools for working with Ribo-Seq data☆19Apr 11, 2024Updated last year
- code of KBR_TC and KBR_RPCA☆10Nov 8, 2017Updated 8 years ago
- Official implementation of the NeurIPS 2019 paper Domes to Drones: Self-Supervised Active Triangulation for 3D Human Pose Reconstruction☆12Sep 23, 2022Updated 3 years ago
- A multi-thread tool for identifying DNA methylation motifs from Pacbio reads☆10Mar 7, 2018Updated 7 years ago
- A python package for simulation and analysis of dynamic Boolean network models☆11Jan 23, 2019Updated 7 years ago
- SkewC a novel quality-assessment method to identify poor quality single-cells in scRNA-seq experiments. The method relies on the measure …☆10Aug 2, 2023Updated 2 years ago