Markusjsommer / TD2Links
TD2
☆22Updated 4 months ago
Alternatives and similar repositories for TD2
Users that are interested in TD2 are comparing it to the libraries listed below
Sorting:
- COsine-based SImilarity Genotyper using pangenomes☆21Updated last week
- Tool for decomposition centromeric assemblies and long reads into monomers☆35Updated 3 years ago
- A Hi-C scaffolding method☆22Updated 3 years ago
- TGSFilter: An ultra-fast and efficient tool for long reads filtering and trimming☆25Updated last year
- use variant nesting information to flter overlapping sites from vg deconstruct output☆26Updated 4 months ago
- ☆28Updated last year
- Integrate multiple genome assemblies into a pangenome graph☆35Updated 3 years ago
- FastK based version of Merqury☆28Updated last month
- SV calling for diploid assemblies☆29Updated last year
- A module for improving the insertion sequences of structural variant calls☆32Updated 4 years ago
- Domain based annotation of transposable elements☆20Updated 3 weeks ago
- Create a pseudohaploid assembly from a partially resolved diploid assembly☆32Updated 5 years ago
- We developed GenomeSyn as a new tool for constructing and visualizing genome synteny, its novel design and implementation can serve as a …☆30Updated 3 years ago
- Telomere local assembly, Improved whole genome polish, and Plastid assembly☆21Updated 6 months ago
- SINE annotation tool for plant genomes☆18Updated last year
- Pipeline to detect PAVs (presence/absence variations) in genome comparison using whole genome alignment.☆29Updated 7 years ago
- A tool for recovering synteny blocks from multiple alignment☆31Updated 4 years ago
- A pipeline for genomic variant detection with genome assemblies at population scale☆29Updated 4 months ago
- SV genotyper for long reads with a variation graph☆13Updated 2 months ago
- Identification of segmental duplications in the genome☆27Updated 3 years ago
- Consensus genome annotation using OMA☆27Updated 4 months ago
- The MafFilter genome alignment processor