☆21Feb 1, 2026Updated last month
Alternatives and similar repositories for cerberus
Users that are interested in cerberus are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Alternative polyadenylation detection from diverse data sources such as 3'-seq, long-read and short-reads.☆34Nov 8, 2023Updated 2 years ago
- Summarise and plot data from long-read ONT (direct RNA/cDNA) BAM files☆15Apr 4, 2024Updated last year
- lncHOME (lncRNA Homology Explorer), a computational pipeline that identifies a unique coPARSE-lncRNA class with conserved genomic locatio…☆12Nov 2, 2023Updated 2 years ago
- Visualization toolkit for differential splicing events☆17Mar 5, 2026Updated 3 weeks ago
- a precise pangenome browser combining linear and graph-based pan-genome☆13Jul 16, 2024Updated last year
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- A Python library to visualize and analyze long-read transcriptomes☆67Jan 19, 2026Updated 2 months ago
- Repository☆10Oct 23, 2024Updated last year
- FLAME: Full Length Adjecency Matrix Enumeration - is a module that allows for the analysis of ONT Nanopore RNA long-read sequencing data.…☆12May 8, 2025Updated 10 months ago
- Integrating long read sequencing enhances short read-based locus-specific transposable element quantification☆10May 12, 2025Updated 10 months ago
- Bash scripts and data used in pantranscriptomic paper☆24Oct 21, 2022Updated 3 years ago
- Isoform-level functional RNA-Seq analysis 🧬☆36Nov 12, 2025Updated 4 months ago
- EM based transcript abundance from nanopore reads mapped to a transcriptome with minimap2☆65Oct 11, 2024Updated last year
- ☆22Jul 30, 2025Updated 7 months ago
- Figures for the CHM13 T2T SD paper.☆11Sep 12, 2021Updated 4 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Technology agnostic long read analysis pipeline for transcriptomes☆157Jan 25, 2024Updated 2 years ago
- An R package for plotting GWAS results from the GAPIT package☆14Oct 9, 2025Updated 5 months ago
- ☆18Apr 18, 2024Updated last year
- Demultiplexing and debarcoding tool designed for LR-Split-seq data.☆25Oct 19, 2023Updated 2 years ago
- ☆39Apr 25, 2023Updated 2 years ago
- a lexicographically-based GTF/GFF sorter☆38Mar 16, 2026Updated last week
- ggplot2-based Manhattan plot☆12Oct 18, 2022Updated 3 years ago
- Utility functions to extend and optimize GenomicRanges functionality.☆10Mar 6, 2025Updated last year
- A software suite for accurate identification, annotation, translation, and feature characterization of annotate transcripts.☆22Sep 1, 2021Updated 4 years ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Invertory of TE-gene isoforms☆14Sep 18, 2023Updated 2 years ago
- Transcript discovery and quantification with long RNA reads (Nanopores and PacBio)☆208Updated this week
- ☆14Apr 26, 2023Updated 2 years ago
- An R package to Identify, Annoatate and Visialize Isoform Switches with Functional Consequences (from RNA-seq data)☆124Mar 12, 2026Updated 2 weeks ago
- PanEffect is a JavaScript framework to explore variant effects across a pangenome. The tool has two views that allows a user to (1) expl…☆13Jan 30, 2024Updated 2 years ago
- Sashimi plots for RNA-seq data using detected transcripts☆31Mar 19, 2026Updated last week
- Identifying large scale inversions between two genomes by mapping genome 1's unique kmers onto genome 2.☆10Jun 6, 2025Updated 9 months ago
- R package 📦 for handy functions when working with GWAS (summary) data☆17Jul 29, 2019Updated 6 years ago
- Scripts for Hill et al. (2022) doi:10.1093/molbev/msac085 🟣☆11Apr 28, 2023Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- Repository for pipeline code☆26Feb 28, 2024Updated 2 years ago
- Ultra-efficient and sensitive method to search for Open Reading Frames in spliced genomes guided by reference annotation to maximize prot…☆43Updated this week
- a pipeline for single cell RNA-seq data analysis☆67Dec 11, 2023Updated 2 years ago
- Python Scripts for Bioinformatics☆15Apr 24, 2024Updated last year
- COsine SImilarity-based Genotyper using pangenomes☆31Feb 13, 2026Updated last month
- Better Alignments with Translated HMMER☆25Mar 10, 2026Updated 2 weeks ago
- ☆10Feb 25, 2024Updated 2 years ago