MarioniLab / DropletUtilsLinks
Clone of the Bioconductor repository for the DropletUtils package.
☆60Updated last month
Alternatives and similar repositories for DropletUtils
Users that are interested in DropletUtils are comparing it to the libraries listed below
Sorting:
- A tool for removing doublets from single-cell RNA-seq data☆74Updated 4 years ago
- A comprehensive tool for processing, analyzing and visulizing single cell chromatin accessibility sequencing data☆76Updated 5 months ago
- ☆55Updated 4 years ago
- mutation(barcode) caller for 10x single cell data☆45Updated 5 years ago
- R package for robust clustering of single cell RNA sequencing data☆39Updated 2 years ago
- R package of colors for the Buenrostro Lab☆84Updated 11 months ago
- Finding surprising needles (=genes) in haystacks (=single cell transcriptome data).☆84Updated 11 months ago
- Genotype-free demultiplexing of pooled single-cell RNA-Seq, using a hidden state model for identifying genetically distinct samples withi…☆41Updated 2 years ago
- A suite of population scale analysis tools for single-cell genomics data including implementation of Demuxlet / Freemuxlet methods and au…☆55Updated 4 years ago
- Reference transcriptome indices build from kallisto for popular organisms☆42Updated last year
- Pipeline for initial analysis of droplet-based single-cell RNA-seq data☆92Updated 3 years ago
- Pileup biallelic SNPs from single-cell and bulk RNA-seq data☆79Updated 3 years ago
- Single Cell Analysis of Five'Ends☆50Updated last year
- R implementation of MULTI-seq sample classification workflow☆64Updated last year
- ☆71Updated last year
- Pipelines for the analysis of 10x single-cell RNA-sequencing data☆58Updated 2 years ago
- ☆77Updated last year
- Discover differential transcript usage from polyA-captured single cell RNA-seq data☆51Updated 2 years ago
- Repo for Physalia course Analysis of Single Cell RNA-Seq data☆32Updated 5 years ago
- Data and analysis scripts for our Embryo Timecourse paper.☆69Updated 5 years ago
- A tool for unsupervised projection of single cell RNA-seq data☆95Updated 4 years ago
- Compendium to "A Systematic Evaluation of Single Cell RNA-Seq Analysis Pipelines"☆54Updated 4 years ago
- Mouse cell atlas☆60Updated 5 years ago
- ☆63Updated 4 years ago
- scRNA-seq cell type identification☆43Updated 5 years ago
- A repository of pipelines for single-cell data in Nextflow DSL2☆75Updated 2 years ago
- marker-based purification of cell types from single-cell RNA-seq datasets☆120Updated 2 weeks ago
- An R toolkit for estimation of cell composition from bulk expression data☆75Updated last month
- BRIE: Bayesian Regression for Isoform Estimate in Single Cells☆42Updated last year
- ☆58Updated 11 months ago