☆56Aug 6, 2025Updated 8 months ago
Alternatives and similar repositories for CoVarNet
Users that are interested in CoVarNet are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Repo with analysis code for the vascular atlas paper☆10Nov 22, 2024Updated last year
- Code for spatial subclone paper☆18Jan 23, 2025Updated last year
- Spot pseudo-Imager on top of histology☆49Dec 12, 2025Updated 4 months ago
- ☆11May 24, 2024Updated last year
- A computational tool for identification of 3D multi-modal spatial neighborhoods☆15Aug 1, 2025Updated 9 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆10Jan 21, 2023Updated 3 years ago
- A deep learning architecture for robust inference and accurate prediction of cellular dynamics☆80Jul 20, 2025Updated 9 months ago
- Pan-cancer quantification of neoantigen-mediated immunoediting in cancer evolution☆14May 4, 2022Updated 4 years ago
- R package: ConDecon is a clustering-independent deconvolution method for estimating cell abundances in bulk tissues using single-cell RNA…☆14Oct 17, 2024Updated last year
- ☆58Aug 8, 2024Updated last year
- ☆12Mar 5, 2024Updated 2 years ago
- ☆36Jan 23, 2024Updated 2 years ago
- Testing a neutral evolution model on cancer sequencing data☆10Feb 17, 2021Updated 5 years ago
- This is a read-only mirror of the CRAN R package repository. forestploter — Create a Flexible Forest Plot. Homepage: https://github.com…☆12Apr 27, 2026Updated last week
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Scanner of specific spatial patterns in tissues☆14Jul 15, 2022Updated 3 years ago
- Network analyses of single cell-based digital twins for personalized treatment of inflammatory disease☆15Mar 23, 2024Updated 2 years ago
- Counterfactual Inference by Machine Learning and Attribution Models☆15Aug 24, 2023Updated 2 years ago
- Seismic R package. Discover cell type-trait associations in minutes for GWAS and single-cell RNA-sequencing data☆27Dec 10, 2025Updated 4 months ago
- ☆19Feb 5, 2025Updated last year
- Scissor package☆262May 10, 2024Updated last year
- ☆12Dec 4, 2023Updated 2 years ago
- ☆19Oct 23, 2023Updated 2 years ago
- Obtain trait-relevant cell subpopulations by incorporating pathway activity transformed scRNA-seq data with GWAS data☆70Nov 23, 2025Updated 5 months ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Segmentation-free Analysis of In Situ Capture data☆14Apr 6, 2026Updated 3 weeks ago
- ☆87Jun 29, 2024Updated last year
- BulkSignalR☆27Mar 30, 2026Updated last month
- ☆27Jun 4, 2023Updated 2 years ago
- ☆18May 23, 2025Updated 11 months ago
- Gene group activity utility functions for Scanpy☆102Dec 21, 2024Updated last year
- ☆25Apr 22, 2026Updated last week
- CellLENS: Cross-domain information fusion for enhanced cell population delineation in single-cell spatial-omics data☆35Jul 24, 2025Updated 9 months ago
- Spatial Tumor Microenvironment (SpatialTME) database is a comprehensive database designed for characterize tumor spatial microenvironment…☆13Dec 4, 2023Updated 2 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- R package expanding integrative analysis capabilities of Seurat by providing seamless access to popular integration methods and to an int…☆33Sep 3, 2025Updated 8 months ago
- A comprehensive tool to infer TF-centred, spatial gene regulatory networks for the spatially resolved transcriptomic data.☆21Apr 27, 2025Updated last year
- Analyze 3'UTR usage in single-cell data.☆15Sep 25, 2021Updated 4 years ago
- scMalignantFinder is a Python package specially designed for analyzing cancer single-cell RNA-seq datasets to distinguish malignant cells…☆18Mar 27, 2026Updated last month
- ☆36Jun 4, 2024Updated last year
- 📦R包:Make TCGA download and prepare easy!☆154Sep 19, 2025Updated 7 months ago
- ☆49Oct 29, 2025Updated 6 months ago