☆57Aug 6, 2025Updated 9 months ago
Alternatives and similar repositories for CoVarNet
Users that are interested in CoVarNet are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Repo with analysis code for the vascular atlas paper☆10Nov 22, 2024Updated last year
- Code for spatial subclone paper☆18Jan 23, 2025Updated last year
- Spot pseudo-Imager on top of histology☆50Dec 12, 2025Updated 5 months ago
- ☆11May 24, 2024Updated 2 years ago
- A computational tool for identification of 3D multi-modal spatial neighborhoods☆15Aug 1, 2025Updated 9 months ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- ☆10Jan 21, 2023Updated 3 years ago
- A deep learning architecture for robust inference and accurate prediction of cellular dynamics☆81Jul 20, 2025Updated 10 months ago
- Pan-cancer quantification of neoantigen-mediated immunoediting in cancer evolution☆14May 4, 2022Updated 4 years ago
- R package: ConDecon is a clustering-independent deconvolution method for estimating cell abundances in bulk tissues using single-cell RNA…☆14Oct 17, 2024Updated last year
- ☆58Aug 8, 2024Updated last year
- ☆12Mar 5, 2024Updated 2 years ago
- ☆36Jan 23, 2024Updated 2 years ago
- Testing a neutral evolution model on cancer sequencing data☆10Feb 17, 2021Updated 5 years ago
- This is a read-only mirror of the CRAN R package repository. forestploter — Create a Flexible Forest Plot. Homepage: https://github.com…☆12Apr 27, 2026Updated 3 weeks ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Scanner of specific spatial patterns in tissues☆14Jul 15, 2022Updated 3 years ago
- Network analyses of single cell-based digital twins for personalized treatment of inflammatory disease☆15Mar 23, 2024Updated 2 years ago
- Counterfactual Inference by Machine Learning and Attribution Models☆15Aug 24, 2023Updated 2 years ago
- Seismic R package. Discover cell type-trait associations in minutes for GWAS and single-cell RNA-sequencing data☆32Dec 10, 2025Updated 5 months ago
- Scissor package☆263May 10, 2024Updated 2 years ago
- ☆19Feb 5, 2025Updated last year
- ☆12Dec 4, 2023Updated 2 years ago
- ☆19Oct 23, 2023Updated 2 years ago
- Obtain trait-relevant cell subpopulations by incorporating pathway activity transformed scRNA-seq data with GWAS data☆71Nov 23, 2025Updated 6 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Segmentation-free Analysis of In Situ Capture data☆14Apr 6, 2026Updated last month
- ☆89Jun 29, 2024Updated last year
- BulkSignalR☆27Mar 30, 2026Updated last month
- ☆27Jun 4, 2023Updated 2 years ago
- ☆19May 23, 2025Updated last year
- Gene group activity utility functions for Scanpy☆103Dec 21, 2024Updated last year
- ☆25Apr 22, 2026Updated last month
- CellLENS: Cross-domain information fusion for enhanced cell population delineation in single-cell spatial-omics data☆35Jul 24, 2025Updated 10 months ago
- Spatial Tumor Microenvironment (SpatialTME) database is a comprehensive database designed for characterize tumor spatial microenvironment…☆13Dec 4, 2023Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- R package expanding integrative analysis capabilities of Seurat by providing seamless access to popular integration methods and to an int…☆34Sep 3, 2025Updated 8 months ago
- A comprehensive tool to infer TF-centred, spatial gene regulatory networks for the spatially resolved transcriptomic data.☆21Apr 27, 2025Updated last year
- Analyze 3'UTR usage in single-cell data.☆15Sep 25, 2021Updated 4 years ago
- scMalignantFinder is a Python package specially designed for analyzing cancer single-cell RNA-seq datasets to distinguish malignant cells…☆20May 13, 2026Updated last week
- ☆36Jun 4, 2024Updated last year
- 📦R包：Make TCGA download and prepare easy!☆153Sep 19, 2025Updated 8 months ago
- ☆49Oct 29, 2025Updated 6 months ago