BioBTree v2: An MCP-enabled biomedical graph database unifying 70+ datasets.
☆20Sep 2, 2026Updated 3 weeks ago
Alternatives and similar repositories for biobtree
Users that are interested in biobtree are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- JSON Stream parser for Go☆24Feb 8, 2021Updated 5 years ago
- ☆31Oct 26, 2021Updated 4 years ago
- Convert your single-cell/spatial analyses to parallel HPC/cloud workflows just using pipes in R☆19Aug 20, 2026Updated last month
- Scoring multiple sequence alignments with Python☆23Jun 18, 2023Updated 3 years ago
- Taxonomic Reconstruction and Analysis of NGS Amplicons - A pipeline based on EMU, a taxonomic profiler optimized for long 16S rRNA reads…☆23Updated this week
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Formation continue sur la FAIRisation du code informatique☆10Jun 15, 2022Updated 4 years ago
- consensus approach for community profiling with nanopore amplicon sequencing data☆18Sep 30, 2024Updated last year
- A registry of Knowledge Graphs, their data sources, and the ways they fit together.☆27Updated this week
- Probabilistic Inference of Molecular Evolution☆10Sep 6, 2021Updated 5 years ago
- ttt☆10Apr 12, 2026Updated 5 months ago
- VETA - A simple tool do evaluate variant predictors☆11Jun 17, 2024Updated 2 years ago
- Java library to map LOINC-encoded test results to Human Phenotype Ontology☆35Jan 16, 2024Updated 2 years ago
- Federating genomes with love (and synteny derived from functional annotations)☆46Aug 26, 2026Updated last month
- Public repository for the biodata resource inventory performed in 2022.☆11Nov 25, 2025Updated 10 months ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- PyRice is an API to access some Rice public databases at the same time with consistent output. PyRice design is modular and implements a …☆13Dec 12, 2024Updated last year
- ☆13Jan 31, 2015Updated 11 years ago
- KDS software for Kinase Drug Selectivity☆10Jun 22, 2026Updated 3 months ago
- Run Blazegraph in Docker☆27Nov 27, 2023Updated 2 years ago
- This repository contains code for the AOP-Wiki XML-to-RDF conversion and guidance to deploy a Virtuoso SPARQL endpoint Docker image that …☆12Sep 20, 2026Updated last week
- TFregulomeR reveals transcription factors’ context-specific features and functions☆15Apr 18, 2022Updated 4 years ago
- Scripts used in the publication Tyler P. Barnum, Israel A. Figueroa, Charlotte I. Carlström, Lauren N. Lucas, Anna L. Engelbrektson, and …☆10Jun 19, 2019Updated 7 years ago
- Wrapper for the built-in Argparse, allowing missing command-line arguments to be filled in by the user via interactive prompts☆11Jun 19, 2020Updated 6 years ago
- Get a nicely-chunked local copy of the biomedical literature (to use for other projects)!☆15Aug 24, 2026Updated last month
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Curated list of resources for variant prioritization☆16Nov 18, 2025Updated 10 months ago
- DarkHorse2 source code☆11May 3, 2022Updated 4 years ago
- Semantic prefix map registry☆14Jul 2, 2026Updated 2 months ago
- Flask app with D3 integration.☆10Feb 27, 2015Updated 11 years ago
- Lightweight validation tool for checking function arguments and data analysis scripts.☆12Dec 24, 2024Updated last year
- Annotation Pipeline for NLR genes☆17Dec 6, 2018Updated 7 years ago
- Visualizing genetic sequence variation☆14Apr 27, 2020Updated 6 years ago
- Annotation of in source LC/MS data☆13Oct 19, 2024Updated last year
- DeepMASS2 is a cross-platform GUI software tool, which enables deep-learning based metabolite annotation via semantic similarity analysis…☆16Jan 22, 2026Updated 8 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- A webtool for the clinical interpretation of CNVs in rare disease patients☆14Jun 10, 2022Updated 4 years ago
- ☆14Dec 27, 2022Updated 3 years ago
- Data for SDI detection (SUPP.AI)☆11Sep 13, 2021Updated 5 years ago
- A comprehensive gene set function enrichment tool for multiple species.☆14Mar 23, 2020Updated 6 years ago
- a metabologenomic pipeline integrating metabolomic and genomic data to identify novel RiPPs and their BGCs☆12Oct 4, 2021Updated 4 years ago
- VIRULIGN: fast codon-correct alignment and annotation of viral genomes☆35Apr 2, 2021Updated 5 years ago
- Translations of language for use with the Sustainable Development Goals.☆11Sep 1, 2026Updated 3 weeks ago