☆28Apr 29, 2026Updated 2 months ago
Alternatives and similar repositories for sCellST
Users that are interested in sCellST are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆57Mar 28, 2025Updated last year
- Fusion strategies to build multimodal predictors for the prediction of immunotherapy response in non-small cell lung cancer☆15Jan 13, 2025Updated last year
- SpaDiT: Diffusion Transformer for Spatial Gene Expression Prediction using scRNA-seq☆25Jun 2, 2026Updated last month
- Scaling up spatial transcriptomics for large-sized tissues: uncovering cellular-level tissue architecture beyond conventional platforms☆50Oct 22, 2025Updated 9 months ago
- ☆19Oct 28, 2025Updated 8 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆73Sep 16, 2025Updated 10 months ago
- Python implementation of a stabilized ICA algorithm☆24Nov 25, 2024Updated last year
- ☆13May 28, 2025Updated last year
- comseg☆24Feb 6, 2025Updated last year
- ☆22Feb 5, 2025Updated last year
- STPath: A Generative Foundation Model for Integrating Spatial Transcriptomics and Whole Slide Images☆53Jul 27, 2025Updated 11 months ago
- ☆12May 30, 2023Updated 3 years ago
- Sparse Convolutional Context-Aware Multiple Instance Learning for Whole Slide Image Classification | https://arxiv.org/abs/2105.02726☆25Oct 11, 2021Updated 4 years ago
- ☆71Feb 11, 2026Updated 5 months ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- [Nature Biomedical Engineering]This is the official code repo for the paper: spEMO: Exploring the Capacity of Foundation Models for Analy…☆22May 9, 2026Updated 2 months ago
- Spatial Expression-Aligned Learning to improve pathology foundation models☆48Feb 17, 2026Updated 5 months ago
- Transformer-based deep learning for spatial transcriptomics enhancement.☆12Mar 15, 2024Updated 2 years ago
- ☆25Apr 3, 2025Updated last year
- [PLoS Computational Biology 2025] SpaMask: Dual Masking Graph Autoencoder with Contrastive Learning for Spatial Transcriptomics☆13Apr 8, 2025Updated last year
- Python code for cross-condition label refinement in single-cell data with HiDDEN☆14Sep 21, 2024Updated last year
- Computational framework for dataset integration☆12Jul 21, 2023Updated 3 years ago
- mclSTExp: Multimodal Contrastive Learning for Spatial Gene Expression Prediction Using Histology Images☆42Jan 10, 2025Updated last year
- ☆41Feb 25, 2026Updated 4 months ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- PyTorch implementation of HisToGene☆58Nov 30, 2021Updated 4 years ago
- We propose SpatialCVGAE, which uses multiple variational graph autoencoders with different initializations to simultaneously generate cor…☆13Jun 24, 2025Updated last year
- An eXplainable Cell-specific machine learning method to predict clinical Phenotypes using single-cell multi-omics☆15Sep 23, 2025Updated 9 months ago
- Gene Expression Prediction from Histology Images via Hypergraph Neural Networks☆18May 19, 2025Updated last year
- Integrating histology and spatial transcriptomics - NeurIPS 2024☆422Apr 16, 2026Updated 3 months ago
- Repository for the Giga-SSL paper☆26Oct 15, 2024Updated last year
- ☆13Sep 30, 2024Updated last year
- MorphLink: Bridging Cellular Morphological Behaviors and Molecular Dynamics in Multi-modal Spatial Omics☆18Dec 7, 2025Updated 7 months ago
- scFOCAL operates through the integration of drug-response transcriptional consensus signatures (TCSs) derived from the LINCS L1000 datase…☆25Jun 23, 2026Updated 3 weeks ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- K-means clustering for large single-cell datasets☆13Feb 10, 2026Updated 5 months ago
- ☆25Nov 25, 2025Updated 7 months ago
- A visual–omics foundation model to bridge histopathology with spatial transcriptomics☆146Jun 3, 2025Updated last year
- ☆22Oct 30, 2022Updated 3 years ago
- ☆30Mar 15, 2024Updated 2 years ago
- Learning meaningful representations of genes☆21Jul 7, 2025Updated last year
- ☆38Jan 22, 2026Updated 6 months ago