CellANOVA: Cell State Space Analysis of Variance for signal recovery in single cell batch integration
☆54Oct 31, 2024Updated last year
Alternatives and similar repositories for cellanova
Users that are interested in cellanova are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Group Technical Effects (GTE)☆16Oct 18, 2025Updated 9 months ago
- Learning meaningful representations of genes☆21Jul 7, 2025Updated last year
- R package for generalized binary covariance decomposition.☆16Jul 13, 2025Updated last year
- Python package to find communication-driven intercellular flows from single-cell RNA-sequencing and spatial transcriptomics data.☆88Mar 19, 2026Updated 4 months ago
- CHOIR : Clustering Hierarchy Optimization by Iterative Random forests (www.CHOIRclustering.com)☆93Apr 15, 2026Updated 3 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆20Nov 12, 2025Updated 8 months ago
- Finding the causality in biological pathways☆14Jul 12, 2023Updated 3 years ago
- Calibrated clustering with artificial variables to avoid over-clustering in single-cell RNA-sequencing☆21Nov 18, 2025Updated 8 months ago
- Detect hierarchical structures in cell-cell communications☆16Jan 26, 2025Updated last year
- Implementation of CellNEST method☆70Jun 23, 2026Updated last month
- ☆51May 18, 2026Updated 2 months ago
- ☆43Jan 12, 2026Updated 6 months ago
- mcRigor: a statistical method to enhance the rigor of metacell partitioning in single-cell data analysis☆17Apr 8, 2026Updated 3 months ago
- Cell identification in high-resolution Spatial Transcriptomics☆15Dec 3, 2025Updated 7 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Deep fusion of spatial transcriptomics and histology images for interpretable high-definition embedding mapping☆18May 26, 2026Updated last month
- Python playground for cell-type-specific biology☆14Jul 10, 2026Updated 2 weeks ago
- Non-parametric density inference for single-cell analysis.☆75Jun 29, 2026Updated 3 weeks ago
- ☆62Feb 14, 2025Updated last year
- Single-Cell Inference of Class Switch Recombination☆24Jun 19, 2026Updated last month
- Toolkit for metacell analysis☆24Aug 8, 2024Updated last year
- Direct estimation of mean and covariance from single cell RNA seq experiments☆136Updated this week
- Supplementary information for "Population-level comparisons of gene regulatory networks modeled on high-throughput single-cell transcript…☆11Jan 15, 2024Updated 2 years ago
- A package for analyzing spatial transcriptomics data with Gaussian smoothing, spatial gene correlation network clustering, gene module vi…☆22Apr 3, 2026Updated 3 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Aligning gene expression trajectories of single-cell reference and query systems☆89Aug 10, 2025Updated 11 months ago
- Single Cell Pretrained Regulatory network INference from Transcripts☆11Sep 17, 2024Updated last year
- ☆67Sep 13, 2024Updated last year
- Repository for RecallME-v.0.1 a variant calling pipelines benchmarker and optimizer☆13Dec 18, 2023Updated 2 years ago
- Methods to discover gene programs on single-cell data☆198Updated this week
- A unifying representation of single cell expression profiles that quantifies similarity between expression states and generalizes to repr…☆257Mar 14, 2026Updated 4 months ago
- Deep Generative Modeling of RNA Velocity☆39Oct 21, 2025Updated 9 months ago
- Repo with analysis code for the vascular atlas paper☆10Nov 22, 2024Updated last year
- INSPIRE: interpretable, flexible and spatially-aware integration of multiple spatial transcriptomics datasets from diverse sources☆20May 28, 2026Updated last month
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- CeLEry: cell location recovery in single-cell RNA sequencing☆38Feb 14, 2025Updated last year
- Multi-modal single cell analysis pipelines☆63Dec 11, 2025Updated 7 months ago
- CellLENS: Cross-domain information fusion for enhanced cell population delineation in single-cell spatial-omics data☆35Jul 24, 2025Updated last year
- Publically accessible code for DIISCO method☆13Oct 15, 2025Updated 9 months ago
- Analysis of cell-cell communication at single-cell resolution☆107Sep 10, 2024Updated last year
- Gene Expression Decomposition and Integration☆21Feb 9, 2026Updated 5 months ago
- Automated ingestion and conversion of various single-cell data formats, within and across species☆16Jan 26, 2026Updated 5 months ago