CellANOVA: Cell State Space Analysis of Variance for signal recovery in single cell batch integration
☆55Oct 31, 2024Updated last year
Alternatives and similar repositories for cellanova
Users that are interested in cellanova are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Group Technical Effects (GTE)☆16Oct 18, 2025Updated 11 months ago
- Learning meaningful representations of genes☆21Jul 7, 2025Updated last year
- R package for generalized binary covariance decomposition.☆16Jul 13, 2025Updated last year
- Python package to find communication-driven intercellular flows from single-cell RNA-sequencing and spatial transcriptomics data.☆91Mar 19, 2026Updated 6 months ago
- CHOIR : Clustering Hierarchy Optimization by Iterative Random forests (www.CHOIRclustering.com)☆93Apr 15, 2026Updated 5 months ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- ☆21Aug 17, 2026Updated last month
- Finding the causality in biological pathways☆14Jul 12, 2023Updated 3 years ago
- Calibrated clustering with artificial variables to avoid over-clustering in single-cell RNA-sequencing☆21Nov 18, 2025Updated 10 months ago
- Detect hierarchical structures in cell-cell communications☆16Jan 26, 2025Updated last year
- Implementation of CellNEST method☆70Jun 23, 2026Updated 3 months ago
- ☆54May 18, 2026Updated 4 months ago
- ☆44Jan 12, 2026Updated 9 months ago
- mcRigor: a statistical method to enhance the rigor of metacell partitioning in single-cell data analysis☆17Apr 8, 2026Updated 6 months ago
- Cell identification in high-resolution Spatial Transcriptomics☆17Updated this week
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Deep fusion of spatial transcriptomics and histology images for interpretable high-definition embedding mapping☆17May 26, 2026Updated 4 months ago
- Python playground for cell-type-specific biology☆14Aug 25, 2026Updated last month
- Non-parametric density inference for single-cell analysis.☆77Sep 24, 2026Updated 2 weeks ago
- ☆61Feb 14, 2025Updated last year
- Single-Cell Inference of Class Switch Recombination☆25Jun 19, 2026Updated 3 months ago
- Toolkit for metacell analysis☆24Aug 8, 2024Updated 2 years ago
- Direct estimation of mean and covariance from single cell RNA seq experiments☆137Sep 22, 2026Updated 3 weeks ago
- Supplementary information for "Population-level comparisons of gene regulatory networks modeled on high-throughput single-cell transcript…☆11Jan 15, 2024Updated 2 years ago
- A package for analyzing spatial transcriptomics data with Gaussian smoothing, spatial gene correlation network clustering, gene module vi…☆25Apr 3, 2026Updated 6 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Aligning gene expression trajectories of single-cell reference and query systems☆94Jul 28, 2026Updated 2 months ago
- Single Cell Pretrained Regulatory network INference from Transcripts☆11Sep 17, 2024Updated 2 years ago
- ☆69Sep 13, 2024Updated 2 years ago
- Repository for RecallME-v.0.1 a variant calling pipelines benchmarker and optimizer☆13Dec 18, 2023Updated 2 years ago
- A unifying representation of single cell expression profiles that quantifies similarity between expression states and generalizes to repr…☆264Mar 14, 2026Updated 6 months ago
- Methods to discover gene programs on single-cell data☆211Updated this week
- Deep Generative Modeling of RNA Velocity☆40Oct 21, 2025Updated 11 months ago
- Repo with analysis code for the vascular atlas paper☆10Nov 22, 2024Updated last year
- INSPIRE: interpretable, flexible and spatially-aware integration of multiple spatial transcriptomics datasets from diverse sources☆23May 28, 2026Updated 4 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- CeLEry: cell location recovery in single-cell RNA sequencing☆38Feb 14, 2025Updated last year
- Multi-modal single cell analysis pipelines☆63Dec 11, 2025Updated 10 months ago
- CellLENS: Cross-domain information fusion for enhanced cell population delineation in single-cell spatial-omics data☆34Jul 24, 2025Updated last year
- Publically accessible code for DIISCO method☆13Oct 15, 2025Updated 11 months ago
- Analysis of cell-cell communication at single-cell resolution☆108Sep 10, 2024Updated 2 years ago
- Gene Expression Decomposition and Integration☆21Feb 9, 2026Updated 8 months ago
- A tool for semi-automatic cell type harmonization and integration☆123Mar 9, 2026Updated 7 months ago